Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq301306 96.9 3e-15 SEQ21091 86.0 6e-12 seq105672 82.4 7e-11 >seq301306 Length=1856 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 |||||| | || || ||||| |||| | ||| |||||||| || |||| || ||| Sbjct 1010 ATGGCGTTGCCGCCATGCCATGCCCTGTTCCAGTTCTACGTTGCAGATGGACGTCTTTCC 1069 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 || ||| | ||||| ||| | || || ||||| ||||||||||||||||| ||| Sbjct 1070 TGTCAGTTGTATCAGCGAAGTGCCGATATATTTTTAGGAGTGCCGTTCAACATTGCCAGT 1129 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGGT 34755 || || |||| || ||||||| || || || || | | | || || || | || Sbjct 1130 TATGCCTTGCTAACTCACATGATTGCACAGGT-ATGTGATCTTCAACCCGGTGATTTTGT 1188 Query 34756 GCATACGTTGGGGGATGCGCATATCTACCTGAACCAC 34792 ||||| |||| ||||| || | |||||||||||| Sbjct 1189 ACATACTCTGGGTGATGCTCACTTGTACCTGAACCAC 1225 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCA-ACC 6611 |||||||||||| | || ||||| |||| ||||| || | || || || | | | Sbjct 1225 GTGGTTCAGGTACAAGTGAGCATCACCCAGAGTATGTACAAAATCACCGGGTTGAAGATC 1166 Query 6612 CCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCC 6671 || || || || ||||||| || |||| || ||||| ||||||||||||||||| | Sbjct 1165 ACAT-ACCTGTGCAATCATGTGAGTTAGCAAGGCATAACTGGCAATGTTGAACGGCACTC 1107 Query 6672 CTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGT 6731 |||| || || | ||| ||||| | ||| ||||| || |||| || |||| Sbjct 1106 CTAAAAATATATCGGCACTTCGCTGATACAACTGACAGGAAAGACGTCCATCTGCAACGT 1047 Query 6732 AGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 |||| ||| | |||| ||||| || || | |||||| Sbjct 1046 AGAACTGGAACAGGGCATGGCATGGCGGCAACGCCAT 1010 >SEQ21091 Length=7149 Score = 86.0 bits (94), Expect = 6e-12 Identities = 166/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||| |||||||| || || ||||| || || ||||||||||| |||||||||| Sbjct 1993 ACATGAGCAATCATGTAAGTCAGAAGAGCATAGCTGGCAATGTTGAATGGCACCCCTAGG 2052 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||| || | || | || || ||||| || || | ||| | || |||||||| Sbjct 2053 CCCATATCAGCTGACCTCTGGTACAGCTGACATGATAACTCATCCCCGGCCACGTAGAAC 2112 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || | |||||| || || || ||||| || | ||| || ||||| | | Sbjct 2113 TGAACCAAACAGTGGCAGGGCGGCAGTGCCATTTTTGGAATATCTACTGGATTCCAAGAG 2172 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856 ||||| | ||| | | ||||| || ||||| ||| |||||| | || || | Sbjct 2173 CACATGATGATACGACGGTCATGGGGACGAGTCTTCAGCATGTGGATCACTTCCTTCAAC 2232 Query 6857 TGGTC 6861 || || Sbjct 2233 TGATC 2237 Score = 86.0 bits (94), Expect = 6e-12 Identities = 166/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 34484 GACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTG 34543 || ||| || || | |||||| ||| ||||| || ||||| | | ||| | Sbjct 2237 GATCAGTTGAAGGAAGTGATCCACATGCTGAAGACTCGTCCCCATGACCGTCGTATCATC 2178 Query 34544 ATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTC 34603 |||||| | ||||| || ||| | || ||||| || || || |||||| | Sbjct 2177 ATGTGCTCTTGGAATCCAGTAGATATTCCAAAAATGGCACTGCCGCCCTGCCACTGTTTG 2118 Query 34604 TGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGAC 34663 || |||||||| || | ||| | || || ||||| || || | || | || Sbjct 2117 GTTCAGTTCTACGTGGCCGGGGATGAGTTATCATGTCAGCTGTACCAGAGGTCAGCTGAT 2058 Query 34664 ATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCT 34723 ||||| |||||||||| ||||||||||| || || ||||| || || |||||||| ||| Sbjct 2057 ATGGGCCTAGGGGTGCCATTCAACATTGCCAGCTATGCTCTTCTGACTTACATGATTGCT 1998 Query 34724 CATGT 34728 ||||| Sbjct 1997 CATGT 1993 >seq105672 Length=1871 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635 |||||| || || |||||||| | |||| ||| ||| |||| || || |||| Sbjct 1675 GATGGCACTGCCGCCGTGCCATGCACTCTTCCAGTTCCACGTGTCGCGCGGCTCGCTGAG 1734 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | || | | |||||||| |||||||| || || Sbjct 1735 CTGCCAGCTCTACCAGCGTTCCGCCGATCTCTTCCTCGGGGTGCCCTTCAACATCGCCAG 1794 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAG 34750 |||||||||||||| || || | || | || ||||| ||| || || ||| Sbjct 1795 CTACGCTCTGCTCACCCACCTGGTGGCACGTGAGGTGGGTCTGGAGCCCGGTGAG 1849 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 6595 CTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGC 6654 ||| || || ||| ||||| || | || | || || |||||||||||||| || || Sbjct 1849 CTCACCGGGCTCCAGACCCACCTCACGTGCCACCAGGTGGGTGAGCAGAGCGTAGCTGGC 1790 Query 6655 AATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAG 6714 |||||||| |||||||| | | || | || || || |||||||||||| ||| Sbjct 1789 GATGTTGAAGGGCACCCCGAGGAAGAGATCGGCGGAACGCTGGTAGAGCTGGCAGCTCAG 1730 Query 6715 CTCCCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATC 6769 | || || |||| ||| ||| |||| | |||||||| || || |||||| Sbjct 1729 CGAGCCGCGCGACACGTGGAACTGGAAGAGTGCATGGCACGGCGGCAGTGCCATC 1675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446261535951360