Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031028.1 Length=45285 Score E Sequences producing significant alignments: (Bits) Value seq103768 237 5e-58 seq311842 226 8e-55 >seq103768 Length=2474 Score = 237 bits (262), Expect = 5e-58 Identities = 317/433 (73%), Gaps = 17/433 (4%) Strand=Plus/Plus Query 17574 CCGTACGGTTACGGCGGAGCCTTCAACCTGAACCCGGACGTCTCGACCGACTGCTCGGGC 17633 || |||| ||||| || || |||| || ||||| ||| |||||||| ||||| ||| Sbjct 1457 CCCTACGCCTACGGTGGCGCGTTCACCCGCGACCCGCGCGTGTCGACCGATTGCTCCGGC 1516 Query 17634 CTGGTCCTGCAGTCGGCCGCGTACCTGACCAAGGTGAAGAAC----TGGGTAGGAAACCG 17689 ||||| |||||| | || || ||| ||| | | || ||| |||||||| Sbjct 1517 CTGGTGCTGCAGACCGCGGC----CTGGTACAGGGGCCGCACCGACTGGCCCGGAAACCG 1572 Query 17690 CTTCGGTTCGACCGAGTCGTTCCGCCTGGACTACCCAGTGGTCTACGAACTCGGTTTCAA 17749 || ||| ||||| ||||||||||||||||||| | |||||||| ||||| ||||| Sbjct 1573 CTACGGCAGCACCGAATCGTTCCGCCTGGACTACCAGATCGTCTACGACCTCGGGTTCAA 1632 Query 17750 GCGCTTCTCCGGCGACCC--CT---CGCGACTCCCCTTCAAGCCGCTCCTGCTGGTCGGC 17804 |||| | |||||| | || |||| || || ||||||||| | |||| ||||| Sbjct 1633 GCGCCTG-CCGGCGGGCGGGCTGGCCGCG-CTGCCGTTCAAGCCGGTGATGCTCGTCGGG 1690 Query 17805 CTGCAGCACGGAGGAGGGGGGATCTACTCCCACACTGCGTGCACCTTCTACGGC-AAGGA 17863 ||||||||||| || || || || |||| ||||| |||||||| || | | | | ||| Sbjct 1691 CTGCAGCACGGCGGCGGCGGAGTCAACTCGCACACGGCGTGCACGCTC-ATGACGATGGA 1749 Query 17864 CGTACCCGGTGGTCCGGTCAAGGAGTCGGCGCGCGGCGTTGACTGGGAGAGTCAGGGCAA 17923 ||| ||||| || |||||| ||||||| ||||||||| ||||||||| | || | Sbjct 1750 CGTTCCCGGCGGGCCGGTCGTCGAGTCGGTGCGCGGCGTCGACTGGGAGTCCCGCGGTGA 1809 Query 17924 CGGGGTCTACTACTACGAGGGAGCTCGGTACTGGAAGGACTCGCTGTTCCACGACTTCTG 17983 ||| || || ||||| || || || |||||| || ||||||||||||||||||| Sbjct 1810 CGGCGTGTATCTGTACGACGGCGCGCGCGCCTGGAACGATCCGCTGTTCCACGACTTCTG 1869 Query 17984 GTACTTGGACGCG 17996 |||| | |||||| Sbjct 1870 GTACCTCGACGCG 1882 >seq311842 Length=41669 Score = 226 bits (250), Expect = 8e-55 Identities = 435/633 (69%), Gaps = 9/633 (1%) Strand=Plus/Plus Query 4419 CAACGCGATCAGCTACCTGCTGGAGAACCCGGCCGTCGAGGGTGGCTTCGGAAACGTCGC 4478 |||||| ||| ||||| | ||| || || | ||||| | |||| | ||||| Sbjct 19476 CAACGCCATCTCGTACCTCGTCGAGGACGCGA---TGGAGGGCGATTTCGCGACGGTCGC 19532 Query 4479 CGAGGGTGGCGCCAAGCCGCAGATCAGCTTCGGTCTGCCGACCTGGGCGACCGACGCGG- 4537 |||||| || | | |||||||||| ||||| ||||| | ||||||||| Sbjct 19533 CGAGGGCGGGACTATGCCGCAGATCCACTTCGTCAACCCGACGCAGAAGACCGACGCACT 19592 Query 4538 CACGCAAGATCGCCGGTCACATCAAGTTCTCCGACGAGTTCCTCGAGGACCTCGCCTTCC 4597 || | ||||||||||| |||| | || ||||||| ||| |||| ||| || |||| Sbjct 19593 CAAG-AAGATCGCCGGATTCATCGACCTCACCGACGAATTCATCGACGACGCCGACTTCG 19651 Query 4598 TCAAGACCGAGGTGGACGAGCGACTCCTGAACCTGCTCGCG-ATGCGCGAGGAAGCCCAG 4656 | ||| | || | || ||||| || ||| ||| ||| ||| || |||| ||| Sbjct 19652 TGAAGTCGGAAATCGATACTCGACTGCTCTACCGGCTGGCGTATGTGC-AGGAGCAGCAG 19710 Query 4657 CTGCTGAACGGTGACGGCACCGGTCAGAACCTGCTCGGCCTGCTCAACCGCTCGGGTGTC 4716 ||||| ||||| ||||||||||||||||| | ||||| |||||||||| || ||| | Sbjct 19711 CTGCTCAACGGCAACGGCACCGGTCAGAACATCCTCGGTGTGCTCAACCGATCCGGTCTA 19770 Query 4717 CAGGTCGAGAACTCGGCCAACTCGGCCGACGACCCGGACGCGGTGTTCCGCGCGATCACC 4776 ||| |||| |||||| | |||| || || || |||||||| | || ||| Sbjct 19771 CAGACCGAGGCGTCGGCCGGGCCCAGCGACAACTTCGAGGCTGTGTTCCGGGGTATGACC 19830 Query 4777 AAGGTCTCGACCGCGACCGAGCTCTCGGCTGACGGCATCGTGATCCACCCGCTGGACTAC 4836 ||||| ||| | | ||| ||| |||||| | || ||||||||| |||||| Sbjct 19831 AAGGTGGACACCAACTCGGGGCTGCCGGTCGACGGCTTGGTCATCCACCCGAACGACTAC 19890 Query 4837 CAGAAGTTCCGCCTCACCAAGGACGGCAACGGACAGTACTTCGGCGGTGGCTTCTTCGAG 4896 ||||||||||| | |||||||||| ||| ||||||| |||||| ||| |||| Sbjct 19891 CAGAAGTTCCGGTTGTCCAAGGACGGTAACCAGCAGTACTACGGCGGCGGCCCGTTCGCA 19950 Query 4897 GGCCAGTACGGCAACGGTGGTGGTCTCGC-CGCACAGCCTCCGCTCTGGGGCCTGCGCAC 4955 |||||||||| ||| || ||||| || | | || |||| ||||| |||| || | || Sbjct 19951 GGCCAGTACGCCAATGGCGGTGGCATCACGCTCA-AGCCGCCGCTGTGGGACCAGAAGAC 20009 Query 4956 CATCGTCACCCCGAACGTGGCGGTCGGCAAGCCGCTCGTCGGCGCGTTCCGCCAGGCAAC 5015 | |||| ||| | || | |||| | ||| ||| ||| | ||| | Sbjct 20010 GGTGATCACTCCGGCTATCGCCGAGGGCACTGTGGCCGTGGGCTCGTGGAAGCTGGCCGC 20069 Query 5016 GACCCTCTACCGCAAGGGTGGAGTCCGGGTCGA 5048 |||| |||||||||||| || ||||| || || Sbjct 20070 GACCGCCTACCGCAAGGGCGGCGTCCGTGTTGA 20102 Score = 185 bits (204), Expect = 3e-42 Identities = 312/448 (70%), Gaps = 29/448 (6%) Strand=Plus/Plus Query 17574 CCGTACGGTTACGGCGGAGCCTTCA--ACCTGAACCCGGACGTCTCGACCGACTGCTCGG 17631 ||||||| | ||| || || |||| ||| ||||| | ||| ||||||||||| | Sbjct 34349 CCGTACGCATTCGGTGGCGCGTTCAGTACCG--ACCCGAAGCGCTCCACCGACTGCTCCG 34406 Query 17632 GCCTGGTCCTGCAGTCGGCCGCGTACCTGACCAAGGTGAAGAACTGGGTAGGAAACCGCT 17691 | |||||| ||||| | | |||| |||| | ||||| |||||||||| Sbjct 34407 GGCTGGTCTTGCAGACCGGCGCGCTGCTGATGGGCCGCACCGACTGGTCGGGAAACCGCT 34466 Query 17692 TCGGTTCGACCGAGTCGTTCCGCCTGGACTACCCAGTGGTCTACGAACTCGGTTTCAAGC 17751 ||| || || || |||||||| ||| ||||||| | |||| ||| |||| ||||||| Sbjct 34467 ACGGCTCAACGGAATCGTTCCGTCTGAACTACCCGATTGTCTTCGACATCGGATTCAAGC 34526 Query 17752 GCTTCTCCGGCGACC-----CCTCGCGACTCCCCTTCAAGCCGCTCCTGCTGGTCGGCCT 17806 || | ||| || | | || ||| || || |||| || |||| ||||| || Sbjct 34527 GCCT-TCCCGCCAGCGGGGTCCAAGCG-CTGGGTTTTGCGCCGATCATGCTCGTCGGACT 34584 Query 17807 GCAGCACGGAGGAGGGGGGATCTACTCCCACACTGCGTGCACC---TTCTACGGCAAGGA 17863 ||||||||| || || || ||| |||||| ||||||||| ||||||| | || Sbjct 34585 GCAGCACGGCGGCGGCGGCGAATACAGCCACACCGCGTGCACCCTGTTCTACGCC---GA 34641 Query 17864 CGTACCCGGTGGTCCGGTCAAGGAGTCGGCGCGCGGCGTTGACTGGGAGAGTCAGGGCAA 17923 ||| || || ||| | |||| |||||| |||||| | ||||||||||| || || || Sbjct 34642 CGTTCCGGGCGGTGAGATCAAACAGTCGGTGCGCGGTATCGACTGGGAGAGCCACGGAAA 34701 Query 17924 ------------CGGGGTCTACTACTACGAGGGAGCTCGGTACTGGAAGGACTCGCTGTT 17971 ||| ||| |||||||||| || || |||||| ||| ||||||| Sbjct 34702 CCGCAACGGCGTCGGAGTCGACTACTACGACAACGCCCGCGCCTGGAACGACCCGCTGTT 34761 Query 17972 CCACGACTTCTGGTACTTGGACGCGAAG 17999 ||| |||||||||||| ||||||| ||| Sbjct 34762 CCAAGACTTCTGGTACCTGGACGCCAAG 34789 Score = 123 bits (136), Expect = 7e-24 Identities = 301/448 (67%), Gaps = 15/448 (3%) Strand=Plus/Plus Query 2559 CGGGGGTGGCGTTCCCCTGCTCGAAGACGGCATGACGCTGCAGCGAGTGGGTTTCTCGGC 2618 || |||||| || || || || ||||||||| || || | | | ||| || Sbjct 17607 CGCGGGTGGGACGCCGCTACTTGAGGACGGCATGGAACTCAAGGCAATCGCGTTCAACGC 17666 Query 2619 CAAGGAGGAACAGTTCGTCGAGGGTACCAAGCTGAGCCTGCAAACGGTGGCCTCGGTCTA 2678 |||||| | |||| |||||||| || ||| ||| |||| || ||| || Sbjct 17667 CAAGGAAAACCAGTGGGTCGAGGGCGTGAAACTGTCGCTGGAAACCTGCGCGCAGGTGTA 17726 Query 2679 CCACGTGAACCCCACGATGGTGGGTCTGCTGGACAACGCGAACTACTCGAACGTGCGCGA 2738 | ||| ||||||||||||||||| | || |||||||| |||||| ||||||||||||| Sbjct 17727 CTTCGTCAACCCCACGATGGTGGGCATTCTCGACAACGCCAACTACGCGAACGTGCGCGA 17786 Query 2739 GTTCCGGCGCTCGCTGTACGGCGAGACTCTCGGACCTCGCCTGGTGGAGC---TGGAGCA 2795 |||||| |||||||||| || | ||||| || | | | |||| || ||| Sbjct 17787 GTTCCGCAAGGCGCTGTACGGAGACAACCTCGG---TCCCGAGATTGAGCGGACGGCGCA 17843 Query 2796 GCGGCTCAACGAGTTCCTGTTGCCGCTGCTGGGCTTCGACAACGCCAA--GTACTACTTG 2853 ||| ||||| || || ||||| ||||| |||| ||| || || ||||| Sbjct 17844 GCGCATCAACAAGAAGCTAGTGCCGAAGCTGG---CCGAC-CCGCGAAACGT-CTACTGC 17898 Query 2854 GAGTTTGACGTGGCCTCGCGGCTGCGCGGCTCGGTGGACGAGCAGGCCAAGGTCCTGCAG 2913 ||||| || | || |||| ||||||| | || || || | | | | |||| Sbjct 17899 GAGTTCAACCTTCAAACGAAGCTGGCCGGCTCGTTTGAAGAACAAGGCGACATGTTGCAA 17958 Query 2914 TCGGCAGTCGGTGGTCCCTGGCTCACGGTCAACGAGGCTCGCGCGCAAAACAACCTGCCC 2973 ||| ||||||| || | | ||| |||||||| ||||| | | ||| || || Sbjct 17959 AAGGCCATCGGTGGCCCGTACATGACGCGCAACGAGGGGCGCGCACGACTGAACATG-CC 18017 Query 2974 GCGC-TCGAGGGTGGAGACGAGCTGATC 3000 |||| |||| || || |||||||||||| Sbjct 18018 GCGCATCGACGGCGGCGACGAGCTGATC 18045 Score = 104 bits (114), Expect = 7e-18 Identities = 313/472 (66%), Gaps = 21/472 (4%) Strand=Plus/Plus Query 3185 CGGTCTGAAGGACGGACAGTTCGAGGCCTACGCCTCGGTGTTCAACAACCGCGACAGCTA 3244 ||| ||| | || || ||||| | ||||||| || ||| |||| |||||||| Sbjct 18250 CGGGCTGGAAGATGGCGAGTTCATCGGCTACGCCAGCGTTTTCGGCAACAAGGACAGCTA 18309 Query 3245 CGGTGACGTGATGCGGAAGGGGTCCTTCAAGAACACTCTCGCCGAGTGGTTCAAGGAAGG 3304 ||| ||||| || ||| | |||| |||||| | ||||| ||| |||| Sbjct 18310 CGGCGACGTCGTGTTACCGGGTGCGTTCACGAACACATTGGCCGACTGG-------AAGG 18362 Query 3305 CCAGACCCGTACCC-TGCCGCTGCTGTGGGGCCACAACCTTTCGGACCCCAACTTCAACC 3363 ||| | | || | ||||||||||||||||||||| | ||||| ||||||||| Sbjct 18363 CCAAGGGCATTCCGATTCCGCTGCTGTGGGGCCACAACACCGCCGACCCTGACTTCAACC 18422 Query 3364 TGGGTGGCGTGTTCGACGCCAAGGAGGACGACAACGGCCTGCGGGT-CAAGGCCGAGTTC 3422 | || | | |||| |||| |||||||| ||| || ||| || || || | | Sbjct 18423 TCGGCGAGATCCTCGATGCCACCCAGGACGACCGCGGGCTCAAGGTGCATGGACG-GCTG 18481 Query 3423 GACCTGGACAACCCGACCTCGGCCCAGGTCTACCGCCTGGTGAAGTCCGGCCGGGTCTCG 3482 || |||| |||| |||| ||| ||| || ||| | || || ||||||||| Sbjct 18482 GATATGGAATCGCCGAAAGCGGCGCAGACCTATCGGCTGCTCAAATCGGGCCGGGTCAAT 18541 Query 3483 GAGCTCTCGTTCGCCT-TCGACTACCTGAAGTACCAGGACGTCGAGCCGGACGCGGAGGA 3541 || | || ||||||| ||| | || | | | || || |||| || | ||||| Sbjct 18542 CAGATGTCATTCGCCTATCGCGTGGTCGATG-GCGCGTACATCCAGCCCGAGGGTGAGGA 18600 Query 3542 CAACGAGTTCGACGGCAAG--TGGTAC-CGCAACGTCGAAGAGGTCAAGCTCTACGAGGT 3598 ||| || | | ||| | | | ||| || ||| || || | ||||||||||| Sbjct 18601 CAA-GACCT-GGCGGGATGCCTACTACGAGCTACG----GGAACTCGAACTCTACGAGGT 18654 Query 3599 CTCGGTGGTCCCGATCGGCGCGAACCCCGAGACCGAGGTGCTGGCGGTCAAG 3650 || | || ||||||||||| |||| ||||||||| | |||||||| ||| Sbjct 18655 GTCCATCGTGCCGATCGGCGCCAACCAGGAGACCGAGATTCTGGCGGTTAAG 18706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144176427892032