Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value SEQ30190 100 4e-16 SEQ78411 91.5 2e-13 >SEQ30190 Length=43192 Score = 100 bits (110), Expect = 4e-16 Identities = 143/198 (72%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CC 48250 || |||||||| ||||| | ||||| || |||||||| || || | || |||| | || Sbjct 6916 AAAGTGAGACCTGGCATAATGCCACGCTTCTTGAGCCAGAAGATAGAAGC-AAAGCTGCC 6858 Query 48251 AGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCT-- 48308 |||||||| ||||| || || || |||||||| | || ||| || | |||| Sbjct 6857 GGAAAAGAAGATGCCCTCCACTGCTGCAAATGCAACTATTCGCTCACCAAACGTGGCAGT 6798 Query 48309 -TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTC 48367 || | | |||||| | ||||||| || ||||||||||| ||||| |||||||| || Sbjct 6797 CTCATGGGAAATCCACTGCAGTGCCCAGTCTGCCTTCTTCTTCACACATGGCATTGTCTC 6738 Query 48368 TATAGCATTAAAGAGAAA 48385 | ||||| || || || Sbjct 6737 CACCGCATTGAACAGGAA 6720 >SEQ78411 Length=2203 Score = 91.5 bits (100), Expect = 2e-13 Identities = 252/386 (65%), Gaps = 3/386 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || || ||||||||||| || || || || || ||||| || || | || Sbjct 1895 TCGTTGGAGAAGGTCAGACCGGGCATCAGGCCCCGCTTCTTAAGCCAGAAGATGGAGGCA 1836 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| ||||| || ||| | ||||| || || | ||| | | Sbjct 1835 AAGGACCCCGAGAAGAAGATGCCCTCGACGACGGCAAAGGCCACCAGCCGCTCGGCAAAG 1776 Query 48303 CTGG---CTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | | |||| || ||||| || | ||||| | ||||||| || | || || Sbjct 1775 GTCGACTCCTCGTCCTGGATCCAGCGCAGCGCCCACTGCGCCTTCTGCTGGATGCACGGG 1716 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCT 48419 || || || || || || |||||||| | || ||| || || | ||| || || Sbjct 1715 ATGGTCTCGATGGCGTTGAAGAGAAACTCGGACTCCTTGGGGTCCTTGATGTAGGTGTCG 1656 Query 48420 ATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAA 48479 || | || || | ||| ||| || || || || ||||| || ||||| || Sbjct 1655 ATCAGCAGCGAGTAGGTCTCGCTGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAG 1596 Query 48480 CATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACT 48539 || | || || | |||||| ||||| | | | || || || ||| ||||| || || Sbjct 1595 CACTTGGCCTCGGGGATCTGCACCTCGGCAGAGAACCGCTCCACCAGGTTCTCGTTCACG 1536 Query 48540 ATTCCATCACTAGCAGCAAAAAATGC 48565 || || ||| ||||| || || || Sbjct 1535 ATCCCGTCAGAGGCAGCGAAGAACGC 1510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691568076344320