Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031061.1 Length=53431 Score E Sequences producing significant alignments: (Bits) Value seq311842 461 3e-125 seq276562 163 1e-35 >seq311842 Length=41669 Score = 461 bits (510), Expect = 3e-125 Identities = 1123/1701 (66%), Gaps = 86/1701 (5%) Strand=Plus/Plus Query 570 CCCGAGGTCGCGTTCTACATGCTGTCGCGCGGGATTCCGCTGCCGGACTATCCGCCGCTG 629 |||||||| |||| || || || ||||| |||| | || |||| ||||||||| Sbjct 15085 CCCGAGGTTGCGTGGTATCTGGAATCACGCGGCTATCCGGTCCCTGACTGCCCGCCGCTG 15144 Query 630 TTCAAGACTCCGGAGCCGCGAGACCTTCCAGGGGCACGGTTCGACCCGCAACGTGTCGAC 689 ||||||| |||||||| || || |||| ||||| |||||||| || | || | |||| Sbjct 15145 ATCAAGACGCCGGAGCCCCGCGAGGTTCCGGGGGCGCGGTTCGATCCCGAGCGAGCCGAC 15204 Query 690 AAGCTGATCGCGGTTTTCTACGCGCTGCGGCACACGAAGGGCCGCCTCGCGGGGCAGCCG 749 | | | | || | |||| | |||||||||| ||||| | |||| || |||| Sbjct 15205 ATGGTAGTTGCTGCTTTCCGGCAGTTGCGGCACACCAAGGGTAGATTCGCTGGTCAGCGC 15264 Query 750 CTGAAGCCAGACCCGTGGCAGGTCGCCTACATCCTGGCCCCGCCGTTC--GGGTGGGTG- 806 | | || ||| ||||||||| || ||||| | || ||| ||| || |||||| Sbjct 15265 TTCGATCCTGACGTGTGGCAGGTGGCGTACATGATCGCGCCG--GTTGCTGGCTGGGTGC 15322 Query 807 --AAGTTCGACGACGACCTGGACATGTGGGTGCGGATCTGC-CGCACGCTGTACGTGGAG 863 |||| || | ||| || || |||||||| ||| | |||| || ||| | || Sbjct 15323 ACAAGT-CGCTG--GACTCGGGCAACTGGGTGCGCATCATCACGCAGGC-GTATTTCGAT 15378 Query 864 CTGCCGCGCAAGAACGGGAAGTCGACGATCGCCGGCGGCATCGGG-ATCTACATGACCTG 922 |||||||||||||||| ||| |||| | || |||| | || ||| |||||| |||| Sbjct 15379 ATGCCGCGCAAGAACGGCAAGACGACTA-CGGCGGCCGGATGGGGTATCTACCTGACGGC 15437 Query 923 TTCCGACGGCGAGGAAGGCGCGCAGGTCATCGCGGCCGCCACGACCGCCGATCAGGCGCA 982 ||||||||||| ||||||||||| |||| || || |||||| || ||||| Sbjct 15438 GGCCGACGGCGAGTTCGGCGCGCAGGTACTCGCCGCGGCGACGACCAAGGAACAGGCCGG 15497 Query 983 GTTCGTGTTCGCCCCGGTCAAGCAGCTCGCCGACAAGTCGCCGCTGCT---GCGGAAACA 1039 |||||| |||| ||||| ||| ||| | ||||||||||| ||| |||| | | Sbjct 15498 GTTCGTCTTCGAGCCGGTGCGCCAGATCGTCAACAAGTCGCCGGGGCTCAAGCGGCA-CT 15556 Query 1040 CACGAACACGTTCAAGAACAAGATCGTCCACAAGCGG-ACCGGTTCG-TATTTCCAGCCG 1097 ||| | | ||||| || |||| |||| |||| | ||| | || ||||||||| Sbjct 15557 TGCGAGCGC--TCAAGCACCGGATCACCCAC--GCGGTATCGGGGAGCTACTTCCAGCCG 15612 Query 1098 GTCGCCAATGCCGGTGACGCCCAACACGGCGCCGACCTGCACAGCGGGATCGTCGACGAG 1157 |||||||||| || ||||| || |||||||| ||| | || ||| |||||||| ||| Sbjct 15613 ATCGCCAATGCGGGCGACGCGCAGCACGGCGCGGACATTCATGGCGCCATCGTCGATGAG 15672 Query 1158 CTCCACCTACACAAGGGCAACGACCTGGTGGAGGCGATCGAGACCGGCACCGGGTCGCGG 1217 || ||||| ||||| | || | ||| | |||||| | |||||||||||||| || || Sbjct 15673 CTGCACCTGCACAAAGACATGGTGCTGATCGAGGCGCTGGAGACCGGCACCGGCTCTCGT 15732 Query 1218 TCCCAGCCGATGATCGTGTTCATCACAACCGCGGACAACTCGCGCAAGGACACCCCGTAC 1277 |||||| | ||| | | |||||| ||||| ||| |||| | ||||||||||| Sbjct 15733 GAGCAGCCGCTCATCATCTACATCACGACCGCCGACGCTGGGCGCCGGCACACCCCGTAC 15792 Query 1278 GACCGGAAACGCACCCTCGTCGAGAAGCTCGCGCGCGGCGTGCTGCA-CGACCCTGCGAC 1336 ||| ||| ||| || | |||||||||| |||||||| ||||| | || || || | Sbjct 15793 GACGAGAAGCGCTCCTTGATCGAGAAGCTGGCGCGCGGGGTGCTCAAGCGGCCGAGC-AT 15851 Query 1337 GTTCGGCGTGATCTTCGGCGC------------------------------NNNNNNNNN 1366 || ||| || | |||| ||| Sbjct 15852 GTACGGGGTTGTGTTCGCCGCCGAGAAGCCCGAATACGAAAACGGCAAGCTGGTCAAGGG 15911 Query 1367 NNNNNNCCCGCTGTCCGAGGAAACCCAGCGGAAAGCCAACCCCGGCTTCGGAGT---TTC 1423 |||| | ||||| || || || || || |||||||| | ||| || | | Sbjct 15912 CGATGACCCGTTCGCCGAGTCGACGCATCGCAAGGCGAACCCCGGATACGGGGTGAGTCC 15971 Query 1424 GCCGACGCGGGCATACCTGCAGCAGGCGGCGGTGAAGGCGCAGCAGTCGCCGGCCGACAT 1483 | ||| |||| ||| || |||| |||| |||||| || | |||||||| | Sbjct 15972 GACGAAGCGG---TACATGGTCGAGGCCGCGGAGAAGGCCAAGGACAGCCCGGCCGAGCT 16028 Query 1484 GGCCTCGTACCTGCGGCTGCACCTGAACGTCCGGACGAAGCAGTCCGAGCGGTACCTGGA 1543 ||| || ||||||||||||| || | ||||| || ||| ||||| || || Sbjct 16029 GGCTCGGTTCCTGCGGCTGCACTTGGGTATTCGGACCAAACAGGAAACCCGGTATCTCGA 16088 Query 1544 CGTCGACAAGTGGGACGACAATGCGAGCATCGTCGACCCGACTCGCCTCGACGGCCGGAT 1603 |||| | ||||||| ||| || ||||| |||| | | || | | ||||||| Sbjct 16089 TATCGAGGACTGGGACGCCAACGCCTCGATCGTGGACCTGTCCCGGTTGGCCGGCCGGCA 16148 Query 1604 CTGTTACGGCGGGCTCGATCTCGCGTCGACGAACGACCTCTCGGCGCTGTGCTGGGTGTT 1663 || ||||||||||| || | | ||||| ||||| |||| ||| |||||||| Sbjct 16149 GTGCTACGGCGGGCTGGACTTGGGTTCGACCTCGGACCTGACGGCACTGGTGTGGGTGTT 16208 Query 1664 CCCCGACGACGACGGGGGGTACGACGCGCTGTGGCGGCTGTGGACGCCGGAGGGAAACCT 1723 |||| ||| ||||| | | ||| | ||| |||| ||| | ||||||| | | Sbjct 16209 CCCCACCGAGGACGGCGCTTTCGAGGTACTGGCCCGGCATTGGGCACCGGAGGATTCCAT 16268 Query 1724 CGACTCGCTCGACAACCGGACGTCGGGCGCGGCGAGCCTGTGGGCGAAGGAAGGGATTCT 1783 |||||||| | || || || ||| ||| ||||| || | || || Sbjct 16269 TCCGGCGCTCGACGAGCGCACCGCGAACGCCGCGTCGACGTGGGTCAAACAGGGCTGGCT 16328 Query 1784 CACCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCATCCGATCCGC-GATCACCCGGG 1842 |||| ||||| ||| ||| | ||| |||| Sbjct 16329 CACCACGACGCCGGGCAATGTGACCGACTACGACTTCAT-CGAGGCGCAGGCCACTCGGG 16387 Query 1843 ACCGGGAACGCTACGAGGTCAAGGAGATCGCCTACGACCGGTGGAACGCCACCCACCTGG 1902 |||| || | | |||| | ||| | || |||||||| ||||| |||| ||| ||| Sbjct 16388 ACCGTGACGAGTTCTTGGTCCAAGAGGTTGCGTACGACCGCTGGAATGCCAACCAGCTGA 16447 Query 1903 TCACACAGCTCACGGATGACGGTGCGCCGATGGTGACGATGGGCCAGGGGTTCGCGTCGA 1962 ||| | || || ||||| || || ||| | || ||||| |||||||| || |||| Sbjct 16448 TCAACAACCTGACCAGCGACGGCGCCCCCATGCTCACCATGGGTCAGGGGTTTGCCTCGA 16507 Query 1963 TGTCCGGGCCGACGAAGGAACTGCAGCGCATCGTCCGCATGGG----CACACCG--GAG- 2015 || || |||||| ||||| |||||||| | ||||||| || | ||||| ||| Sbjct 16508 TGAGCGCGCCGACCAAGGATCTGCAGCGGTTGATCCGCATAGGCGCTCGCACCGACGAGA 16567 Query 2016 --------------AAGCCGGTCCTGCGGCACGGCGGAAATCCGGCGATGCGATGGATGG 2061 |||||| | | || |||||||| |||||| | |||| ||| | Sbjct 16568 ACGGTTTGCCGATCAAGCCGATGATCCGCCACGGCGGTAATCCGCTGTTGCGCTGGGAGA 16627 Query 2062 TCGACAACTTCGCGGTCGCCATGGATGACGCCGGGAACGTGAAGCCATCGAAGAAGAACG 2121 |||||||||||||||| || ||||| || || || |||||||| ||| || | Sbjct 16628 TCGACAACTTCGCGGTTGCGATGGACCCGGCAGGAAATGTGAAGCCGGACAAGGCCAATG 16687 Query 2122 CCGGCGACAAGATCGACGGCGTCGTCGCACTGATCATGGGTCTCTCGCGAGCGATCGCGA 2181 | |||||||||||||||||||| || || |||||||||| || || || ||| | || Sbjct 16688 CTGGCGACAAGATCGACGGCGTGGTGGCGCTGATCATGGCGCTTTCCCGCGCGCTAGCCG 16747 Query 2182 ACCAGGAGCCCGAGACCGAGG 2202 | |||| |||||| ||||| Sbjct 16748 CCAAGGAAACCGAGA-CGAGG 16767 Score = 122 bits (134), Expect = 3e-23 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 165 CGCCGAGGCCGCCGACGTGGATGTCGCGCGAGGCGAAGGCCGAGTGGAAGCGCGTCGTCC 224 |||||| ||||||| ||| | ||||||||||| |||||||||||||||||||| | || Sbjct 14647 CGCCGAATCCGCCGAGCTGGCTCTCGCGCGAGGCAAAGGCCGAGTGGAAGCGCGTTGCCC 14706 Query 225 CGGGGCTGACGCGGCTGGGGTTGCTCAAGGAGGAGGACCGGGCGGCGCTGACGGTGTACT 284 | || ||| ||| || | || ||||| ||| ||||||||| || || ||| |||| Sbjct 14707 CTGGTCTGGTGCGTCTTGACCTGATCAAGCCGGAAGACCGGGCGACGTTGGCGGCCTACT 14766 Query 285 GCGAGACGTGGGCCACTTACGTCGACGCGATCCGGGATGT 324 ||||||||||||| | ||||| |||| | |||||| Sbjct 14767 GCGAGACGTGGGCGCGGTTCGTCGCGGCGACCAAGGATGT 14806 >seq276562 Length=247471 Score = 163 bits (180), Expect = 1e-35 Identities = 295/426 (69%), Gaps = 24/426 (6%) Strand=Plus/Minus Query 19448 AGGCACCCGATGAGCTTTCGTACGGCCTACGGCTACAAGTACTCGGAGAACGGTTGGCGA 19507 |||||| | ||||| ||||| || ||||||||| ||| || || || ||| ||||||| Sbjct 237575 AGGCACACCATGAGTTTTCGCACCGCCTACGGCAACACCTATTCCGAAAACAGTTGGCGC 237516 Query 19508 ATGTGCAACCGCGACGAGTGCG---TCACGGTCACC----GT---TGCCGGGATGGGCCT 19557 ||||||||||||||||| |||| ||||| || | || | || || || | Sbjct 237515 ATGTGCAACCGCGACGAATGCGACATCACGCGCATCCCCGGTCTGTACCTGGTTGATACC 237456 Query 19558 GCACGTCCGCTCC-GGCTACGCCGCCGAGG-TGCTCGGCGCGTGGGTTCGCTGGTACCAC 19615 |||| | || | || | |||| || | ||||| || ||| | |||||| || Sbjct 237455 GCACCGCTGCGCAAGGGGGCACCGCTGACCATTCTCGGGGCATGGTTGTACTGGTATGAC 237396 Query 19616 GAGCACGTCGAGCGCATCGACCTGTACAAGCCGCTCGACGACTGGGGGTGGTCGAACACC 19675 ||||||| ||| | | | ||| | ||||| |||||| ||||| Sbjct 237395 CGCAACGTCGAAGAGATCATC---TCC---CCGGTG------TGGGGCTGGTCGGACACC 237348 Query 19676 AACGACGTCGCGACGTCGAATCACCTGTCGGGCACTGCCGTCGACCTCAACGCCACCCAG 19735 ||||||||||| | |||||||||||| ||||||| ||||| ||| ||||||| ||||| Sbjct 237347 AACGACGTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTGGACATCAACGCACCCCAG 237288 Query 19736 TACCCGTGGGGCCGCCGCGTAATGCCGGCCGACCGCATCGCGAAGGTGCGCCGGGGTCTC 19795 ||||||||||| || ||||| | |||||||| || || ||| || || Sbjct 237287 TACCCGTGGGGTGCACGAACCATGCCCAGCACTCGCATCGCCAAAGTCCGCGAAGGACTT 237228 Query 19796 GCCCTGTTCGAGGGCACCATCTTCTGGGGCGCCGACTGGTCACGGGCCGACGAGATGCAC 19855 || || |||||| | ||| |||||| || |||||| || |||||||| |||||| Sbjct 237227 AAGCTCTTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAACCGCGCCGACGAAATGCAC 237168 Query 19856 TACCAG 19861 |||||| Sbjct 237167 TACCAG 237162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170133092015808