Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031072.1 Length=47898 Score E Sequences producing significant alignments: (Bits) Value seq216857 405 2e-108 seq276562 141 3e-29 seq311842 96.9 1e-15 seq138175 86.0 2e-12 >seq216857 Length=94037 Score = 405 bits (448), Expect = 2e-108 Identities = 815/1190 (68%), Gaps = 59/1190 (5%) Strand=Plus/Plus Query 2832 TCGGCGCCGCGATCGCCTACCACGACAACATGATCGCGATCGCCGGTCTCGCCCACTTCC 2891 ||||||| ||||||| ||||||||| || ||| ||| | | | | || ||||||| Sbjct 32823 TCGGCGC-GCGATCGAGTACCACGACCACCAGATGGCGCTGGTTGCGTTGGCGCACTTCC 32881 Query 2892 TCAACCTCGAAGGCAAGGGCGGCTCGTACGCGCTGGCCAGCGTCCAGGAGCACACGTTCT 2951 | || || || ||||||||||| || || |||||||| |||||||||| |||||||| Sbjct 32882 TGAATCTGGACGGCAAGGGCGGTTCCTATGCGCTGGCGAGCGTCCAGGCCGACACGTTCG 32941 Query 2952 CCCAGTCGGTGCAGACCGTCGGCGAGCAGACCCGCGACATCGGCAACGCGCACGTGATCG 3011 ||||| ||||| || |||| ||| | | |||||| | | | || ||| | | | Sbjct 32942 TGCAGTCCGTGCAAACGGTCGCCGATGACATCCGCGATACAGCGCAGGCCCACATCGTTG 33001 Query 3012 AGGACCTCGTCGACATCAACTTCGGCCTCGACGAGCAGGCTCCGCTGCTGGTGTTCGACG 3071 | |||||||| |||||||| ||||| || || | || || ||||||| | ||| | Sbjct 33002 AAGACCTCGTTGACATCAATTTCGGTGAGGATGAACCCGCGCCCTTGCTGGTATGCGATG 33061 Query 3072 AGATCGGCTCCCACCAGACCGCCACCGCCGCGGCGCTGAAGATGCTCGTCGAAGCCGGCC 3131 | || ||||||| |||| ||||||||| ||||||||| | ||||||||| | || || Sbjct 33062 AAATTGGCTCCCGCCAGGACGCCACCGCAGCGGCGCTGCAAATGCTCGTCAACGCAGGAT 33121 Query 3132 TGCTGTCACCCGACATCCTCGTCGAGCAGAAAG--TGCGCCAGCACTTCGGCATTCCCGC 3189 | || | || ||| || |||| | || | ||| | | ||| | |||| Sbjct 33122 TATTGACGCCGGAC--CCACGTCTCGAAGCGTTCATCCGCTCGGCCACCGGGCTACCCG- 33178 Query 3190 GAAGGCCGACGACACACCACCGGCGCAGCCGACGCCCGGGTCGGCGCCCGTCGCGCCGG- 3248 |||| |||| | | | ||||| | | | |||||| |||||| Sbjct 33179 ---GGCC--CGACCCGGATGTCGAGGAGCCGGAGGAAGCCGCCAAGCCCGTTCCGCCGGT 33233 Query 3249 -CCGCGAGCG---CCCGGGCAACTGTTGCACA-GCGCG--------CAACAGTTG---GC 3292 || | |||| |||| || || ||| | ||||| ||| ||| | || Sbjct 33234 ACCTCCAGCGACGCCCGAGCCGGTGGGGCAGAAGCGCGAGCCCATCCAAGAGTCGATAGC 33293 Query 3293 GC-TGACCAGGGGACATTGTTCTGATGGTCGACGTCCCCACGACGCCGGTCCTCGCGACC 3351 | || |||| | | ||| ||| || || ||| | |||| |||||||| Sbjct 33294 TCCTGTGCAGGAGGAACTGT------GGTAGAAGTTCCCGAAGCCCCGGCGCTCGCGACA 33347 Query 3352 ATTCCTCGTGTCGAGCTCGGCTCGGTCGGCACGTGGGACATCTCGAACATCGCC--GGA- 3408 || || |||| ||| ||| || || || ||| ||||||||||| ||| ||| Sbjct 33348 ATCCCGAGTGTTGAGATCGCTTCCGTTGGGTACTGGAACATCTCGAAC---GCCATGGAC 33404 Query 3409 TGGCATCCGACCGCCGAGGACTTCGCGTCCGCGGTCGCCGCGCTCGACTGCCCTGCGGTG 3468 ||||| || | |||||| || | ||| | || |||||||||||||||||||| || ||| Sbjct 33405 TGGCACCCCAGCGCCGACGATCTAGCGGCGGCCGTCGCCGCGCTCGACTGCCCGGCAGTG 33464 Query 3469 CGGCGCCCGGTCCTCAAGTTCGGCCACTCCGACGGCCCCGGAGA------CCCATCGATC 3522 || || ||||| ||||||||||| || | | || || || || ||| || ||| Sbjct 33465 CGCCGGCCGGTGCTCAAGTTCGGGCATACAGGCGAACCGGGCGAGGGCGACCCGTCTATC 33524 Query 3523 GGGATCGTCGACAACCTCGCCAC-CACCGACGACGGACAGACCCTCGTCGGCGACTTCGT 3581 ||| ||||||| | | || | | |||| ||||| ||||| || |||| |||| || Sbjct 33525 GGGCTCGTCGATG-CTTTGCGTCTCTCCGAGGACGGGCAGACGCTTCTCGGGGACTATGT 33583 Query 3582 TGGCGTGCCAGCGTGGCTCGCTTCCGCCGACACCGAAGGACGGTCGGTCATCGCGTCGGC 3641 || || ||| ||| | || |||||||| | || || |||||||||||||||||||| Sbjct 33584 CGGTGTCCCAAGCTGGTTGGCCGCCGCCGACTCTGAGGGCCGGTCGGTCATCGCGTCGGC 33643 Query 3642 CTACCCAGACCGATCCGGCGAGTGGGAACACAACTACGTGTGCCAGCTCGGCCACACCCA 3701 || || ||||| || || |||| | | | |||||||||||||||||||||||||||| Sbjct 33644 ATATCCCGACCGCTCTGGTGAGTTCCAGCGCGACTACGTGTGCCAGCTCGGCCACACCCA 33703 Query 3702 CCCGTTCGTCCTCCACGCCATGGCGCTGCTCGGTGTGACGAAACCGGGAATCGGAGATCT 3761 ||||||||| | ||||| | ||||||||||| |||| | || |||||||| ||| Sbjct 33704 CCCGTTCGTGGTACACGCTGTCGCGCTGCTCGGCGTGATGCGGCCCGGAATCGGCACTCT 33763 Query 3762 GCAGTCCCTGTACGACCTGTACGCCAAAGC-GCCGCAGGAGAAGGAGATGGCTATGGCCT 3820 | || || |||||||| ||| |||| || ||| | || |||||| || |||||| Sbjct 33764 CGAATCGCTATACGACCTCTACACCAAGGCACCCGAAACAG-AGGAGACCGCCATGGCCG 33822 Query 3821 CAACAGCTCTGGCGTCTGTGACCGTCGATCAGGTGCGCGCGGCG----TACTACAACGGT 3876 || || || | | || |||||||| || ||||| |||||| |||| Sbjct 33823 GAATCGCCGCAGCAGCCG-GAACGTCGATCGACGACGTTCGGCGCAACTACTACGACGGC 33881 Query 3877 CCAGCCGCCACCAACTACAACCTGTGGATTCGGGAGATGCTCGTCGACCCGCCGCAGCTC 3936 | ||| | ||| | |||||||||| |||||| || ||||||| || | ||| Sbjct 33882 C---CCGGAAAACACTGGGCCTTGTGGATTCGCGAGATGTTCATCGACCCTGCGGAACTC 33938 Query 3937 ATCGTCCAGAACGATGCCGACAGCACGCTGCTGAAAGTGCCGTTCACCGT 3986 || || |||||||| | ||| | |||||||| ||||||| |||||| Sbjct 33939 ATTGTGCAGAACGACGAAGACGACTCGCTGCTGCGGGTGCCGTACACCGT 33988 >seq276562 Length=247471 Score = 141 bits (156), Expect = 3e-29 Identities = 288/424 (68%), Gaps = 38/424 (9%) Strand=Plus/Minus Query 18337 ATGAGTTTCAGAACAGCGTACGGCTACAAGTACTCCGAGAACGGTTGGCGGATGTGCAAC 18396 |||||||| | || || |||||| ||| || ||||| ||| ||||||| ||||||||| Sbjct 237566 ATGAGTTTTCGCACCGCCTACGGCAACACCTATTCCGAAAACAGTTGGCGCATGTGCAAC 237507 Query 18397 CGCGACGAGTGCGTCACGATCAC---CGTCGCCGGCATGGGCCTCCACGTCAGAT-CCG- 18451 |||||||| |||| || |||| | || |||| || ||| || ||| ||| Sbjct 237506 CGCGACGAATGCGACA---TCACGCGCATCCCCGGTCTGTACCTG---GTT-GATACCGC 237454 Query 18452 ---GTTACGCA-----GCAGAGGTG------CTCGGCGCGTGGGTCCGCTGGTACCACGA 18497 | | |||| ||| | || ||||| || ||| | |||||| || Sbjct 237453 ACCGCTGCGCAAGGGGGCACCGCTGACCATTCTCGGGGCATGGTTGTACTGGTATGACCG 237394 Query 18498 GAACGTCGAGCCCATCGACCTGTACAAGCCCCTCGACGACTGGGGATGGTCGAACACCAA 18557 |||||||| ||| | | || || | ||||| |||||| ||||||| Sbjct 237393 CAACGTCGAAGAGATC----------ATCTCCCCGGTG--TGGGGCTGGTCGGACACCAA 237346 Query 18558 CGACGTCGCCACGTCGAACCACCTCTCCGGCACCGGGGTCGACCTCAACGCCACCCAGTA 18617 ||||||||||| ||||| ||||| | ||||||| || ||| ||||||| ||||||| Sbjct 237345 CGACGTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTGGACATCAACGCACCCCAGTA 237286 Query 18618 CCCGTGGGGGCGGCGCGTCATGCCGGCCGACCGCATCGCGAAGGTCCGGCGCGGTCTCGC 18677 ||||||||| || |||||| | |||||||| || ||||| || || Sbjct 237285 CCCGTGGGGTGCACGAACCATGCCCAGCACTCGCATCGCCAAAGTCCGCGAAGGACTTAA 237226 Query 18678 ACTGTTCGAGGGCAACATCTTCTGGGGCGCAGACTGGTCGCGCGCCGACGAGATGCACTA 18737 || || |||||| ||| |||||| || |||||| ||||||||||| |||||||| Sbjct 237225 GCTCTTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAACCGCGCCGACGAAATGCACTA 237166 Query 18738 CCAG 18741 |||| Sbjct 237165 CCAG 237162 >seq311842 Length=41669 Score = 96.9 bits (106), Expect = 1e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 42114 CGGTCACGACCTCGCGTGCTGGTGCCCGCTCGACCAGCCGTGTCACGCCGATGTGCTGAT 42173 ||| |||||||||||||||||||||||||||||||||||||| || ||||| || ||| | Sbjct 9645 CGGCCACGACCTCGCGTGCTGGTGCCCGCTCGACCAGCCGTGCCATGCCGACGTACTGCT 9704 Query 42174 CGAGATCGCGAAC 42186 ||| ||||| ||| Sbjct 9705 CGAAATCGCCAAC 9717 >seq138175 Length=113840 Score = 86.0 bits (94), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 15171 TGAAGATGTACGCCAACACCGCCGTCCCGGAATCGCTGAAGTTCCCGCACGACGCCGTCG 15230 |||||| ||||||||| | || || || ||| || || | |||||||| || || | Sbjct 60079 TGAAGAACTACGCCAACCCGAATGTGCCCGAGTCGATGCAGATTCCGCACGAGGCGGTGG 60138 Query 15231 GCTCCGACCACGACTCGATCGGCCTGTTCCAGCAGCGGCAGGCAGGGTGGGGGACCGTCG 15290 | ||| |||| |||| | || | |||||||||| || | |||||||| | || Sbjct 60139 GGCACGATCACGCCTCGGTTGGGATCTTCCAGCAGCAGCCGT---GGTGGGGGTCGATCA 60195 Query 15291 CCGACCGGATGGATCCGCACCGCT-CGGCGAAGATGTTCTACGACGCGCTGATGAAGGTC 15349 |||| |||| | || | | | ||| ||| |||||||| |||||| |||| ||| Sbjct 60196 AGGACCTGATG-ACCCCCGGGGTGGCCGCGCAGAAGTTCTACGCGGCGCTGCTGAAAGTC 60254 Query 15350 CCCGGCTGGGAAACCATGGACATGGGTGCCGCGGCACAGGCGGTGCAGCG 15399 ||||||||| | |||| || ||| || |||||||||||||| Sbjct 60255 GGCGGCTGGGAGTCGATGGCGCCCACTGTCGCTGCCCAGGCGGTGCAGCG 60304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152502571196160