Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031099.1 Length=44536 Score E Sequences producing significant alignments: (Bits) Value seq216857 187 7e-43 seq295643 100 8e-17 seq311842 89.7 1e-13 >seq216857 Length=94037 Score = 187 bits (206), Expect = 7e-43 Identities = 442/662 (67%), Gaps = 62/662 (9%) Strand=Plus/Plus Query 2320 TCTGGCCGCACTCGATC--GACGTGTTCAAGCGCATG-TCGGCCGAGGACGGCCGCGTCG 2376 ||||||||| ||| | ||||| || ||||||| || || ||||||| ||| | | Sbjct 32009 TCTGGCCGCTATCGGTGTGGACGTA--CACGCGCATGGTCCGC-GAGGACGCCCGAATTG 32065 Query 2377 CCTCCTTGCTGGAGGCTATCTATCAGCCGATCCTGCAGACGCAGTGGCGAATCGACCCCA 2436 | || | || ||| | | |||||||| | || |||||| ||| | || Sbjct 32066 CATCGGTACTCAGAGCTGTTGGGCTGCCGATCCGCCGCACCACGTGGCGTATCCGGCGCA 32125 Query 2437 ACGGCGCCCCGGATGAGGTCGTCGAGTTCGTCGCCAGCAACTTCGGACTGCCCATCGTCG 2496 |||| ||| || ||||| ||||| |||||||| | ||| ||||||| ||||||| | Sbjct 32126 ACGGTGCCAGTGACGAGGTTGTCGAATTCGTCGCGCGAAACCTCGGACTTCCCATCGAGG 32185 Query 2497 GCGCCGA------CGAGAACAAG---CCGA---CCGCCCGGACACGCGGGCGATTCATCT 2544 ||||||| ||| ||||| |||| || | || || ||||| |||||| | Sbjct 32186 GCGCCGAGGGCACCGAAGACAAGAACCCGAAATCCACGCGTACTCGCGGCCGATTCTCAT 32245 Query 2545 GGGATCAGCACCTCGAGCAGGCGCTCAGCAGCAT-CGAGTTCGGGCACGCGTTCTTCGAG 2603 |||| ||||||| ||||||| |||| | | ||| | |||||||||| | |||||| Sbjct 32246 GGGACAAGCACCTACAGCAGGCACTCATGTCCCTGCGA-TACGGGCACGCGGTGTTCGAG 32304 Query 2604 CAGCTGTACCGACCCGACGATCAGGGCCGGTACG---------TTCTGCGCAAGCTCGCT 2654 ||| |||| | ||| | |||||| | | | | ||||||||||| ||| Sbjct 32305 CAGGTGTATCAGATCGAGGGCGAGGGCCCGGAAGCCCGAGCGGTGCTGCGCAAGCTTGCT 32364 Query 2655 CCGCGCCCTCCGGAGACGATCGCCAAGATCAACGTCGCCCGCGACGGCGGCCTGGAGTCG 2714 || || || | | |||||| | || || || |||||||||||||| || | ||| Sbjct 32365 CCACGTCCCCAAGCCACGATCTCGAAATGGAATGTGGCCCGCGACGGCGGGCTCGTATCG 32424 Query 2715 ATCGAGCAGTACCCGGCCGGTG----------TGCA------GG---------TCGT--C 2747 ||||||||| | || ||| | | |||| || || | Sbjct 32425 ATCGAGCAGCAGCCCGCCAGCGCCTTCACCGTTGCATCCAATGGGATGACCATTCCTTAT 32484 Query 2748 GGCGGGCCAGGCGCGGCGGAGATTCCCGTCGACCGACTGGTGGCGTACGTGCGAAAGCCG 2807 ||||| ||| | ||| | | |||||||| || ||||| | || ||| |||| Sbjct 32485 GGCGGCCCATTGGATTCGGTGCTGCCCGTCGAGCGTCTGGTCGTCTATTTGCACGAGCCC 32544 Query 2808 CGTCCGGGCCAGTGGTTCGGCCGCTCGCTGCTGCGTCCCGCGTACAAGCATTG---GCTC 2864 ||| ||| |||| ||||| | ||||| ||||||||||||||||| || |||| Sbjct 32545 GATCCAGGCGTGTGGATCGGCAACAGCCTGCTACGTCCCGCGTACAAGCACTGGAAGCTC 32604 Query 2865 GCGAAGGACGAGCTGATGCGCATCGAGATCGCGACGGCCCGCCGCAACGGCATGGGTGTG 2924 || ||||||||||||||||||||| ||| | || |||||| ||||||| |||||| Sbjct 32605 ---AAAGACGAGCTGATGCGCATCGAGGCCGCCGCAGCACGCCGCCACGGCATCGGTGTG 32661 Query 2925 CC 2926 || Sbjct 32662 CC 32663 Score = 131 bits (144), Expect = 5e-26 Identities = 251/365 (69%), Gaps = 15/365 (4%) Strand=Plus/Plus Query 3093 GCGATCGAGTACCACGACAAGCAGATGGCTCTCGCCGCGCTCGCGCACTTCCTGAACCTT 3152 |||||||||||||||||| | |||||||| || | ||| | |||||||||||||| || Sbjct 32830 GCGATCGAGTACCACGACCACCAGATGGCGCTGGTTGCGTTGGCGCACTTCCTGAATCTG 32889 Query 3153 GA---CAAGGGCGGATCGTACGCTCTCGCTTCGGTTCTCAAGTCG--CCGTTCGACCAGT 3207 || ||||||||| || || || || || || || | || |||||| |||| Sbjct 32890 GACGGCAAGGGCGGTTCCTATGCGCTGGCGAGCGT--CCAGGCCGACACGTTCGTGCAGT 32947 Query 3208 CGCTGGGGTCGATCGCCGACGGGGTTCGCTCGACAGCCCAGGCGCACGTCCTCGAGGACC 3267 | || || ||||||| | | ||| ||||| ||||| ||| || | || |||| Sbjct 32948 CCGTGCAAACGGTCGCCGATGACATCCGCGATACAGCGCAGGCCCACATCGTTGAAGACC 33007 Query 3268 TCGTGGACGTCAACTGGGGACCGGATATGCCGGCGCCGCGGCTCGTGTTCGACGAGAT-- 3325 |||| ||| |||| | || |||| || ||||| ||| || | ||| || || Sbjct 33008 TCGTTGACATCAATTTCGGTGAGGATGAACCCGCGCCCTTGCTGGTATGCGATGAAATTG 33067 Query 3326 ----CGGCCAGGACGCGACGGCGGCGACGCTGCAGATGCTCGTCACCGCGGGTGTTCTCA 3381 | |||||||||| || || ||| ||||||| |||||||||| ||| || | | | Sbjct 33068 GCTCCCGCCAGGACGCCACCGCAGCGGCGCTGCAAATGCTCGTCAACGCAGGATTATTGA 33127 Query 3382 CCCCCGACGACCGCCTGGAGGCCTTCGAGCGC-CAGCAGCTCGGACTGCCGGCGGCCGAC 3440 | || ||| || || || || ||| ||| | || | ||| || || | | ||||| Sbjct 33128 CGCCGGACCCACGTCTCGAAGCGTTCATCCGCTCGGCCAC-CGGGCTACCCGGGCCCGAC 33186 Query 3441 CCGGA 3445 ||||| Sbjct 33187 CCGGA 33191 >seq295643 Length=2312 Score = 100 bits (110), Expect = 8e-17 Identities = 187/272 (69%), Gaps = 12/272 (4%) Strand=Plus/Minus Query 29974 AGCCCCAGGCTCGCGACGAGCTGGCGGCGCAGCATCATCGCGTGAAACACCACCGCGACG 30033 || ||||| |||||| | | | | ||||| ||||||||| || || || |||||| Sbjct 838 AGGCCCAGCGCCGCGACCAACGCGGGCCGCAGGCGCATCGCGTGGAAGACGACAGCGACG 779 Query 30034 CTCGCGTCAGCGAGATCGGCGATGACCTCGATGTACGGCTCGTTG---GCGCCCGCCGGT 30090 | ||| | | || ||||||||| ||| || |||||||| |||||||| Sbjct 778 GCGGGGTCGACCATGTCCGCGATGACCACGAGGTCGGGCTCGTTCTCTGCGCCCGCG--- 722 Query 30091 CCGATGAACAGGACGGGTGCGGCACCGGCCCGACGCGCAGCGATCGGAACCTGCAGTGCC 30150 |||| | || ||||| || |||| || | |||| || || | || | Sbjct 721 CCGACGTGGAGCACGGGCACGCTGCCGGGAATGCGGGGCGCGACCGCGACGCGGAGGCCG 662 Query 30151 GGGTAGGAGACGACGGTGCGGATCTCGGCGTCGTTGATCCCGTGGGCCCGGGCGCTGG-- 30208 |||||||||| ||||||||||||||||||||| ||| ||||| ||||||||| Sbjct 661 GGGTAGGAGATCACGGTGCGGATCTCGGCGTCGGTGACGCCGTGCCGGTGGGCGCTGGGC 602 Query 30209 -TGGTGGTCTCGATCCGCATGCCATAAGTGTA 30239 | ||||| |||||||| ||| |||||||| Sbjct 601 TTCGTGGT---GATCCGCACGCCTTAAGTGTA 573 >seq311842 Length=41669 Score = 89.7 bits (98), Expect = 1e-13 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 8498 GTCGGTCTGATCGACGCCGCCAAGGGCATCCCGGTCACACCCG-AGGGCGAGGTCAAGAA 8556 |||||||||||||||| |||||||||||| || ||||| |||||||||||| | Sbjct 22403 GTCGGTCTGATCGACGATAAGAAGGGCATCCCGCTC-GACCCGTCTGGCGAGGTCAAGGA 22461 Query 8557 GTTCAACGGCTTCGGCCACACCGCCTATCGCACCAAGTTCGTCCAGGGCCAGGTGCAGAC 8616 || | |||| ||||| || |||| | || |||||| | ||||| || | ||| Sbjct 22462 GTACGACGGGTTCGGTCATCCCGCGTTCCGGGTGAAGTTCCGCAAGGGCAAGCTCAAGAG 22521 Query 8617 CGGATTCACCGCCCTCGAGGACAACGCGGTGACCGCGC-AGATCGTTCTGCCGGGCTCGT 8675 || ||||| || || || || |||| ||| ||| || | || ||||| |||||| Sbjct 22522 TGGCTTCACTGCGCTGGAATGGAATTCGGTAACC-CGCAAGTTTGTGCTGCCCGGCTCGG 22580 Query 8676 CGTCCGACAAGATCGGC 8692 | | ||||||||||| Sbjct 22581 CCAGCAACAAGATCGGC 22597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141789791330688