Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031118.1 Length=54167 Score E Sequences producing significant alignments: (Bits) Value seq216857 188 2e-43 SEQ55377 188 2e-43 seq276562 156 1e-33 SEQ97744 100 1e-16 seq234526 86.0 2e-12 >seq216857 Length=94037 Score = 188 bits (208), Expect = 2e-43 Identities = 239/326 (73%), Gaps = 2/326 (1%) Strand=Plus/Plus Query 2841 TGGCGCCCAACGGCACGCTGCCCGACA-TCGGTGCCGCGATCGCCTACCACGACAACATG 2899 || |||| | ||||||| | ||| |||| || ||||||| ||||||||| || | Sbjct 32795 TGTCGCCGCAGGGCACGCCGATGGACCCTCGGCGC-GCGATCGAGTACCACGACCACCAG 32853 Query 2900 ATCGCGATCGCCGGTCTCGCGCACTTCCTCAACCTCGAGGGCGGCGGCGGGTCGTACGCG 2959 || ||| | | | | ||||||||||| || || || ||| ||||| || || ||| Sbjct 32854 ATGGCGCTGGTTGCGTTGGCGCACTTCCTGAATCTGGACGGCAAGGGCGGTTCCTATGCG 32913 Query 2960 CTGGCGAGCGTGCAGGAACACACCTTCACCCAGTCGGTGCAGACGACCGCCGAATGGATC 3019 ||||||||||| |||| |||| ||| ||||| ||||| ||| |||||| ||| Sbjct 32914 CTGGCGAGCGTCCAGGCCGACACGTTCGTGCAGTCCGTGCAAACGGTCGCCGATGACATC 32973 Query 3020 CGCGACACCGCGACCGCCCACATCGTCGAGGACCTCGTCGACATCAACTTCGGCGTCGAC 3079 ||||| || ||| ||||||||||| || |||||||| |||||||| ||||| | || Sbjct 32974 CGCGATACAGCGCAGGCCCACATCGTTGAAGACCTCGTTGACATCAATTTCGGTGAGGAT 33033 Query 3080 GAACCAGCACCCCGGATCGTGTTCGACGAGATCGGCAGCCGGCAGGACGCGACCGCCGCG 3139 ||||| || ||| | | || | ||| || || ||| ||| |||||||| ||||| ||| Sbjct 33034 GAACCCGCGCCCTTGCTGGTATGCGATGAAATTGGCTCCCGCCAGGACGCCACCGCAGCG 33093 Query 3140 GCGTTGAAGATGCTCGTCGAAGCGGG 3165 ||| || | ||||||||| | || || Sbjct 33094 GCGCTGCAAATGCTCGTCAACGCAGG 33119 Score = 129 bits (142), Expect = 2e-25 Identities = 245/358 (68%), Gaps = 21/358 (6%) Strand=Plus/Plus Query 2181 TGCCGATCCGTCGGACGCCGTGGCGAGTCGCTTCCAATGGGGCGCGCGATGAGGTGACCG 2240 |||||||||| || || ||||||| || ||| || || | || ||||| || Sbjct 32090 TGCCGATCCGCCGCACCACGTGGCGTATCCGGCGCAACGGTGCCAGTGACGAGGTTGTCG 32149 Query 2241 AGTTCGTTGCGAAGAACCT-GAACTTGCCGATCGAGGGTGGCGA------------CAAT 2287 | ||||| ||| ||||| | |||| || |||||||| | ||| ||| Sbjct 32150 AATTCGTCGCGCGAAACCTCGGACTTCCC-ATCGAGGGCGCCGAGGGCACCGAAGACAAG 32208 Query 2288 CTGCCGCAGCCGACGCGCACGAAGGGCAAGTTCTCGTGGGTGCAGCACCTTCAACAGGCG 2347 ||| | | ||||| || ||| ||||| |||| ||||||| || ||||| Sbjct 32209 AACCCGAAATCCACGCGTACTCGCGGCCGATTCTCATGGGACAAGCACCTACAGCAGGCA 32268 Query 2348 CTCACCGCACTGCCATACGGGCACAGCGTGTTCGAGCAGGTGTATTGGCCGCCGGACGAC 2407 |||| | |||| |||||||||| |||||||||||||||||| | || ||| Sbjct 32269 CTCATGTCCCTGCGATACGGGCACGCGGTGTTCGAGCAGGTGTATCAGATCGAGGGCGAG 32328 Query 2408 G--CGGGACGCACGAGC----CTGCGCAAGCTCGCGCCGCGGCCGCAGCGCACGATCTCG 2461 | | ||| || ||||| ||||||||||| || || || || || |||||||||| Sbjct 32329 GGCCCGGAAGCCCGAGCGGTGCTGCGCAAGCTTGCTCCACGTCCCCAAGCCACGATCTCG 32388 Query 2462 AACTGGAACGTCGCGCTCGACGGTGGGCTGATGTCGATCGAGCAGTA-CGCGCCGGCG 2518 || ||||| || || | |||||| ||||| | |||||||||||| | | |||| ||| Sbjct 32389 AAATGGAATGTGGCCCGCGACGGCGGGCTCGTATCGATCGAGCAGCAGCCCGCCAGCG 32446 Score = 113 bits (124), Expect = 2e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 4107 AGGAAAGGAGGCCCCCGTGGCCACTCTCAAAGAAGGCCTCGCGGAGCGCCTCGGCATCGA 4166 |||||||||| | ||| |||| || ||||| ||||||||| || |||||||| Sbjct 34151 AGGAAAGGAGCACATTGTGCCCACCCTGAAAGAGGGCCTCGCGCAGAAGCTCGGCATTTC 34210 Query 4167 CGCCGATGCGGACGACGAGACCGCGTTGAAGGCGCTCGACGAAGCTCTCGAGGAGCGCAG 4226 |||||| ||||||||||||||| | ||| ||||||||||||| ||||||| |||||| Sbjct 34211 CGCCGACGCGGACGACGAGACCACATTGCAGGCGCTCGACGAGGCTCTCGCCGAGCGCGC 34270 Query 4227 CGACGACACC 4236 |||| |||| Sbjct 34271 CGACACCACC 34280 >SEQ55377 Length=3000 Score = 188 bits (208), Expect = 2e-43 Identities = 246/338 (73%), Gaps = 2/338 (1%) Strand=Plus/Minus Query 33495 GGTGCTCGTCGACAACGACCGCGGCGCCTCCAGGTATTCACGCAAGGACCGTCCCGCATA 33554 ||| |||| ||||||||| |||||| | |||| | |||||||| || || || Sbjct 1081 GGTCCTCGCTGACAACGACATCGGCGCGAGCCGGTACAGCGGAAAGGACCGGCCGGCCTA 1022 Query 33555 CCGGCGTCTCGCCGA-GCTCCTCGCCCCGGGCGACGTCCTCGTCACCTGGGAAGCGTCCC 33613 |||| || || | | |||| ||||| ||||| |||||||||||||| ||||| | Sbjct 1021 CCGGGAACT-GCAGTCGGTCCTGCGGCCGGGTGACGTGCTCGTCACCTGGGAGGCGTCGC 963 Query 33614 GCGCGCAGCGCGACCTGAGTGCCTACCTGCAGCTCCGAGACCTGTGCGCGGAACGCGGCG 33673 |||||||||| ||||| |||||| ||||||| || ||||||||||| || ||| | Sbjct 962 GCGCGCAGCGTGACCTCGCCGCCTACGTGCAGCTGCGTGACCTGTGCGCCGACATCGGTG 903 Query 33674 TGCTGTGGAGCTACTCCGGCCGCACCTACGACCTCGCGCGCGGTGACGATCGCTTCACCA 33733 ||| |||| ||| ||||||| ||||||||| || |||||||||||| ||| ||| Sbjct 902 TGCGGTGGGCGTACACCGGCCGGGTGTACGACCTCACGGACGGTGACGATCGGTTCTCCA 843 Query 33734 CCGGTCTCGACGCGCTGCTGTCGGAGAAGGAAGTGGAGGTGACCCGCGAACGGGTCCTCC 33793 |||| ||||| ||||| || | |||||||| | ||| || ||| | ||||| || | Sbjct 842 CCGGGCTCGATGCGCTCCTCGCCGAGAAGGAGGCCGAGCAGATCCGGGCTCGGGTGCTTC 783 Query 33794 GGTCGATGCGCGCCAACGCGGCCGCCGGCCGACCCCAC 33831 | | ||| || ||| ||| || ||||||||| Sbjct 782 GCGGTAAGCGGTCCGCGGCGATCGCGGGACGACCCCAC 745 >seq276562 Length=247471 Score = 156 bits (172), Expect = 1e-33 Identities = 289/422 (68%), Gaps = 34/422 (8%) Strand=Plus/Minus Query 18280 ATGAGTTTCAGAACAGCGTACGGCTACAAGTACTCCGAGAACGGTTGGCGGATGTGCAAC 18339 |||||||| | || || |||||| ||| || ||||| ||| ||||||| ||||||||| Sbjct 237566 ATGAGTTTTCGCACCGCCTACGGCAACACCTATTCCGAAAACAGTTGGCGCATGTGCAAC 237507 Query 18340 CGCGACGAGTGCGTCACGGTCAC---CGTCGCCGGCATGGGCCTCCACGTGAGATC---C 18393 |||||||| |||| || |||| | || |||| || ||| ||| | | | Sbjct 237506 CGCGACGAATGCGACA---TCACGCGCATCCCCGGTCTGTACCTGGT--TGATACCGCAC 237452 Query 18394 GGTTACGCA-----GCAGAGGTG------CTCGGCGCGTGGGTGCGCTGGTACCACGAGA 18442 | | |||| ||| | || ||||| || ||| || |||||| || | Sbjct 237451 CGCTGCGCAAGGGGGCACCGCTGACCATTCTCGGGGCATGGTTGTACTGGTATGACCGCA 237392 Query 18443 ACGTCGAGCCCATCGACCTGTACAAGCCCCTCGACGACTGGGGATGGTCGAACACCAACG 18502 ||||||| ||| | | || || | ||||| |||||| ||||||||| Sbjct 237391 ACGTCGAAGAGATC----------ATCTCCCCGGTG--TGGGGCTGGTCGGACACCAACG 237344 Query 18503 ACGTCGGCAACTCGAACCACTTGTCGGGCACCGGGGTCGACCTCAACGCCACCCAGTACC 18562 |||||| ||||||||| ||| || ||||||||| || ||| ||||||| ||||||||| Sbjct 237343 ACGTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTGGACATCAACGCACCCCAGTACC 237284 Query 18563 CGTGGGGCCGCCGCGTCATGCCGGCCGATCGTATCGCGAAGGTCCGGCGCGGTCTCGCCC 18622 ||||||| || |||||| | ||| ||||| || ||||| || || | Sbjct 237283 CGTGGGGTGCACGAACCATGCCCAGCACTCGCATCGCCAAAGTCCGCGAAGGACTTAAGC 237224 Query 18623 TGTTCGAGGGCAACATCTTCTGGGGCGCCGACTGGTCGCGCGCCGACGAGATGCACTACC 18682 | || |||||| ||| |||||| || |||||| ||||||||||| |||||||||| Sbjct 237223 TCTTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAACCGCGCCGACGAAATGCACTACC 237164 Query 18683 AG 18684 || Sbjct 237163 AG 237162 >SEQ97744 Length=86731 Score = 100 bits (110), Expect = 1e-16 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 33567 CGAGCTCCTCGCCCCGGGCGACGTCCTCGTCACCTGGGAAGCGTCCCGCGCGCAGCGCGA 33626 |||| || | | ||||| || || | || || ||||| || || || || |||||||| Sbjct 22729 CGAGATCTTGTCGCCGGGTGATGTGTTAGTGACTTGGGAGGCTTCGCGAGCTCAGCGCGA 22670 Query 33627 CCTGAGTGCCTACCTGCAGCTCCGAGACCTGTGCGCGGAACGCGGCGTGCTGTGGAGCTA 33686 ||| | || || | |||| ||||| |||||| || || || || ||||| ||| Sbjct 22669 CCTTCGGGCTTATGTAGAGCTTCGAGATCTGTGCTTTGAGCGTGGAGTTTTGTGGTCCTA 22610 Query 33687 CTCCGGCCGCACCTACGACCTCGCGCGCGGTGACGATCGCTTCACCACCGGTCTCGACGC 33746 | || || || | ||||| |||| |||||||| || ||| ||||| || || || Sbjct 22609 CAGTGGACGGACGTTTGACCTGGCGCAGGGTGACGACCGGTTCGGAACCGGCCTGGATGC 22550 Query 33747 GCTGCTGTCGGAGAAGGAAGTGGAGGTGACCCGCGAACGGGTCCT 33791 |||||| ||||||| |||| ||| || ||| || || || || Sbjct 22549 GCTGCTCGCGGAGAAAGAAGCTGAGCAGATCCGTGAGCGTGTACT 22505 >seq234526 Length=1326 Score = 86.0 bits (94), Expect = 2e-12 Identities = 134/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 38045 CGCTGGCCGAAGGGAAGTTGGATGAGGCT--GAAGTCCGCGGACACACTCCGCGCGATCA 38102 || ||||| ||||| | |||||| | || |||| ||| ||||| |||||||| | | Sbjct 976 CGATGGCCAAAGGGGACATGGATGCGACTCCGAAG--CGCTGACACTCTCCGCGCACTGA 919 Query 38103 TGCAGATGCAGGGGTTTTCGATGTCCCGCCTGGGCCGATACGCCGGTTGCTCGAAGAGCT 38162 || || | | | || ||| | || ||| ||||| |||| ||||||||| | | Sbjct 918 TGGAGCAGGACGACTTCTCGCTCGGACGGTTGGCGCGATATGCCGACTGCTCGAAGGGTT 859 Query 38163 TCATCGCCCATCTGTGCTCCGGTCGGAAGACAACGTGCACGCCCCAGCTGGCCGAGAACA 38222 |||| |||| ||| || |||||| || | ||||||||| |||| ||||| || Sbjct 858 TCATTTCCCACCTGCTTTCGGGTCGGCGAACGAGCTGCACGCCCGAGCTCGCCGATCGCA 799 Query 38223 TCGCGGAGGC 38232 |||||||||| Sbjct 798 TCGCGGAGGC 789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172478304978624