Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031233.1 Length=50346 Score E Sequences producing significant alignments: (Bits) Value seq311842 342 2e-89 seq276562 154 5e-33 seq234526 109 2e-19 >seq311842 Length=41669 Score = 342 bits (378), Expect = 2e-89 Identities = 543/763 (71%), Gaps = 22/763 (3%) Strand=Plus/Plus Query 570 CCCGAGGTCGCGTTCTACATGCTGTCGCGCGGGATTCCGCTGCCGGACTATCCGCCGCTG 629 |||||||| |||| || || || ||||| |||| | || |||| ||||||||| Sbjct 15085 CCCGAGGTTGCGTGGTATCTGGAATCACGCGGCTATCCGGTCCCTGACTGCCCGCCGCTG 15144 Query 630 TTCAAGACTCCGGAGCCGCGAGACCTTCCAGGGGCACGGTTCGACCCGCAACGTGTCGAC 689 ||||||| |||||||| || || |||| ||||| |||||||| || | || | |||| Sbjct 15145 ATCAAGACGCCGGAGCCCCGCGAGGTTCCGGGGGCGCGGTTCGATCCCGAGCGAGCCGAC 15204 Query 690 AAGCTGATCGCGGTTTTCTACGCGCTGCGGCACACGAAGGGCCGCCTCGCCGGTCAACCG 749 | | | | || | |||| | |||||||||| ||||| | |||| ||||| | Sbjct 15205 ATGGTAGTTGCTGCTTTCCGGCAGTTGCGGCACACCAAGGGTAGATTCGCTGGTCAGCGC 15264 Query 750 CTGAAGCCAGACCCGTGGCAGGTCGCCTACATCCTGGCCCCGCCGTTC--GGGTGGGT-- 805 | | || ||| ||||||||| || ||||| | || ||| ||| || ||||| Sbjct 15265 TTCGATCCTGACGTGTGGCAGGTGGCGTACATGATCGCGCCG--GTTGCTGGCTGGGTGC 15322 Query 806 AAAGTTCGACGACGACCTGGACATGTGGGTGCGGATCTGC-CGCACGCTGTACGTGGAGC 864 | | ||| | ||| || || |||||||| ||| | |||| || ||| | || Sbjct 15323 ACAAGTCGCTG--GACTCGGGCAACTGGGTGCGCATCATCACGCAGGC-GTATTTCGATA 15379 Query 865 TGCCGCGCAAGAACGGGAAGTCGACGATCGCCGGCGGCATCGGG-ATCTACATGACCTGT 923 |||||||||||||||| ||| |||| | || |||| | || ||| |||||| |||| Sbjct 15380 TGCCGCGCAAGAACGGCAAGACGACTA-CGGCGGCCGGATGGGGTATCTACCTGACGGCG 15438 Query 924 TCCGACGGCGAGGAAGGCGCGCAGGTCATCGCGGCCGCCACGACCGCCGATCAGGCGCAG 983 ||||||||||| ||||||||||| |||| || || |||||| || ||||| | Sbjct 15439 GCCGACGGCGAGTTCGGCGCGCAGGTACTCGCCGCGGCGACGACCAAGGAACAGGCCGGG 15498 Query 984 TTCGTGTTCGCCCCGGTCAAGCAGCTCGCCGACAAGTCGCCGCTGCT---GCGGAAACAC 1040 ||||| |||| ||||| ||| ||| | ||||||||||| ||| |||| | | Sbjct 15499 TTCGTCTTCGAGCCGGTGCGCCAGATCGTCAACAAGTCGCCGGGGCTCAAGCGGCA-CTT 15557 Query 1041 ACGAACACGTTCAAGAACAAGATCGTCCACAAACGG-ACCGGTTCG-TACTTCCAGCCGG 1098 ||| | | ||||| || |||| |||| ||| | ||| | |||||||||||| Sbjct 15558 GCGAGCGC--TCAAGCACCGGATCACCCACG--CGGTATCGGGGAGCTACTTCCAGCCGA 15613 Query 1099 TCGCCAATGCCGGTGACGCCCAACACGGCGCCGACCTGCACAGCGGGATCGTCGACGAGC 1158 |||||||||| || ||||| || |||||||| ||| | || ||| |||||||| |||| Sbjct 15614 TCGCCAATGCGGGCGACGCGCAGCACGGCGCGGACATTCATGGCGCCATCGTCGATGAGC 15673 Query 1159 TCCACCTACACAAGGGCAACGACCTGGTGGAGGCGATCGAGACCGGCACCGGGTCGCGGT 1218 | ||||| ||||| | || | ||| | |||||| | |||||||||||||| || || Sbjct 15674 TGCACCTGCACAAAGACATGGTGCTGATCGAGGCGCTGGAGACCGGCACCGGCTCTCGTG 15733 Query 1219 CCCAGCCGATGATCGTGTTCATCACAACCGCGGACAACTCGCGCAAGGACACCCCGTACG 1278 |||||| | ||| | | |||||| ||||| ||| |||| | |||||||||||| Sbjct 15734 AGCAGCCGCTCATCATCTACATCACGACCGCCGACGCTGGGCGCCGGCACACCCCGTACG 15793 Query 1279 ACCGCAAGCGCACCCTCGTCGAGAAGCTCGCGCGCGGCGTGCT 1321 || |||||| || | |||||||||| |||||||| ||||| Sbjct 15794 ACGAGAAGCGCTCCTTGATCGAGAAGCTGGCGCGCGGGGTGCT 15836 Score = 206 bits (228), Expect = 9e-49 Identities = 547/842 (65%), Gaps = 36/842 (4%) Strand=Plus/Plus Query 1389 ACACAACGGAAAGCCAACCCCGGCTTCGGAGT---TTCGCCGACGCGGGCATACCTGCAG 1445 || || || || || |||||||| | ||| || | || ||| |||| ||| || Sbjct 15934 ACGCATCGCAAGGCGAACCCCGGATACGGGGTGAGTCCGACGAAGCGG---TACATGGTC 15990 Query 1446 CAGGCGGCGGTGAAGGCACAGCAGTCGCCGGCCGACATGGCGTCATACCTGCGGCTGCAC 1505 |||| |||| |||||| || | |||||||| |||| | ||||||||||||| Sbjct 15991 GAGGCCGCGGAGAAGGCCAAGGACAGCCCGGCCGAGCTGGCTCGGTTCCTGCGGCTGCAC 16050 Query 1506 CTGAACGTCCGGACGAAGCAGTCCGAA---CGGTATCTGGACGTCGACAAGTGGGACGAC 1562 || | ||||| || ||| ||| |||||||| || |||| | ||||||| | Sbjct 16051 TTGGGTATTCGGACCAAACAG---GAAACCCGGTATCTCGATATCGAGGACTGGGACGCC 16107 Query 1563 AACGCGAGCATCATCGACCCGACTCGCCTCGACGGCCGGATCTGTTACGGCGGGCTCGAT 1622 ||||| ||| | |||| | | || | | ||||||| || ||||||||||| || Sbjct 16108 AACGCCTCGATCGTGGACCTGTCCCGGTTGGCCGGCCGGCAGTGCTACGGCGGGCTGGAC 16167 Query 1623 CTCGCGTCGACGAACGACCTCTCGGCGCTGTGCTGGGTGTTCCCCGACGACGAAGGCGGG 1682 | | ||||| ||||| |||| ||| |||||||||||| ||| || |||| Sbjct 16168 TTGGGTTCGACCTCGGACCTGACGGCACTGGTGTGGGTGTTCCCCACCGAGGACGGCGCT 16227 Query 1683 TACGACGCGCTGTGGCGGCTGTGGACCCCGGAAGGCAACCTCGACTCGCTCGACAACCGC 1742 | ||| | ||| |||| ||| | ||||| | | | |||||||| | ||| Sbjct 16228 TTCGAGGTACTGGCCCGGCATTGGGCACCGGAGGATTCCATTCCGGCGCTCGACGAGCGC 16287 Query 1743 ACGTCGGGCGCGGCGAGCCTGTGGGCCAAGGAAGGGATTCTCACCGTNNNNNNNNNNNNN 1802 || || ||| ||| ||||| ||| | || |||||| Sbjct 16288 ACCGCGAACGCCGCGTCGACGTGGGTCAAACAGGGCTGGCTCACCACGACGCCGGGCAAT 16347 Query 1803 NNNNNNNNNNNNNNNTTCATCCGCTCCGC-GATCACCCGCGACCGGGAACAGTACGAGGT 1861 |||||| | ||| | ||| || ||||| || ||| | ||| Sbjct 16348 GTGACCGACTACGACTTCATC-GAGGCGCAGGCCACTCGGGACCGTGACGAGTTCTTGGT 16406 Query 1862 CAAGGAGATCGCCTACGACCGGTGGAACGCCACCCACCTCGTCACACAGCTCACCGACGA 1921 | | ||| | || |||||||| ||||| |||| ||| || ||| | || ||| ||| Sbjct 16407 CCAAGAGGTTGCGTACGACCGCTGGAATGCCAACCAGCTGATCAACAACCTGACCAGCGA 16466 Query 1922 CGGCGCGCCGATGGTGACGATGGGCCAGGGATTCGCGTCGATGTCCGGGCCGACGAAGGA 1981 |||||| || ||| | || ||||| ||||| || || |||||| || |||||| ||||| Sbjct 16467 CGGCGCCCCCATGCTCACCATGGGTCAGGGGTTTGCCTCGATGAGCGCGCCGACCAAGGA 16526 Query 1982 ACTGCAGCGCATCGTCCGCATGGGC------ACC---------------CCGCAGAAGCC 2020 |||||||| | ||||||| ||| ||| ||| ||||| Sbjct 16527 TCTGCAGCGGTTGATCCGCATAGGCGCTCGCACCGACGAGAACGGTTTGCCGATCAAGCC 16586 Query 2021 GGTCCTGCGGCACGGCGGTAACCCGGCGATGCGGTGGATGGTCGACAACTTCGCTGTCGC 2080 | | | || ||||||||||| ||| | |||| ||| | ||||||||||||| || || Sbjct 16587 GATGATCCGCCACGGCGGTAATCCGCTGTTGCGCTGGGAGATCGACAACTTCGCGGTTGC 16646 Query 2081 CATGGATGACGCCGGGAACGTGAAGCCATCGAAGAAGAACGCCGGCGACAAGATCGACGG 2140 ||||| || || || |||||||| ||| || || ||||||||||||||||| Sbjct 16647 GATGGACCCGGCAGGAAATGTGAAGCCGGACAAGGCCAATGCTGGCGACAAGATCGACGG 16706 Query 2141 CGTCGTCGCACTGATCATGGGTCTCTCGCGAGCGATCGCGAACCAGGAGCCCGAGACCGA 2200 ||| || || |||||||||| || || || ||| | || | |||| |||||| ||| Sbjct 16707 CGTGGTGGCGCTGATCATGGCGCTTTCCCGCGCGCTAGCCGCCAAGGAAACCGAGA-CGA 16765 Query 2201 GG 2202 || Sbjct 16766 GG 16767 Score = 123 bits (136), Expect = 8e-24 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 165 CGCCGAGGCCTCCGACGTGGATGTCGCGCGAGGCGAAGGCCGAGTGGAAGCGCGTCGTCC 224 |||||| || |||| ||| | ||||||||||| |||||||||||||||||||| | || Sbjct 14647 CGCCGAATCCGCCGAGCTGGCTCTCGCGCGAGGCAAAGGCCGAGTGGAAGCGCGTTGCCC 14706 Query 225 CGGGTCTGACGCGGCTGGGGCTGCTCAAGGAGGAGGACCGGGCGGCGCTGACGGTGTACT 284 | |||||| ||| || | ||| ||||| ||| ||||||||| || || ||| |||| Sbjct 14707 CTGGTCTGGTGCGTCTTGACCTGATCAAGCCGGAAGACCGGGCGACGTTGGCGGCCTACT 14766 Query 285 GCGAGACGTGGGC 297 ||||||||||||| Sbjct 14767 GCGAGACGTGGGC 14779 >seq276562 Length=247471 Score = 154 bits (170), Expect = 5e-33 Identities = 288/420 (69%), Gaps = 30/420 (7%) Strand=Plus/Minus Query 19391 ATGACTTTCAGAACAGCCTACGGCTACAAGTACTCCGAAAACGGTTGGCGAATGTGCAAC 19450 |||| ||| | || ||||||||| ||| || ||||||||| ||||||| ||||||||| Sbjct 237566 ATGAGTTTTCGCACCGCCTACGGCAACACCTATTCCGAAAACAGTTGGCGCATGTGCAAC 237507 Query 19451 CGCGACGAGTGCGTCACGGTCAC---CGTCGCCGGGATGGGCCTGCACGT--CCGCTCCG 19505 |||||||| |||| || |||| | || |||| || |||| | |||| ||| Sbjct 237506 CGCGACGAATGCGACA---TCACGCGCATCCCCGGTCTGTACCTGGTTGATACCGCACCG 237450 Query 19506 ----GCTACG-----CCGCCGAGG-TGCTCGGCGCGTGGGTGCGCTGGTACCACGAGAAT 19555 || | | |||| || | ||||| || ||| || |||||| || || Sbjct 237449 CTGCGCAAGGGGGCACCGCTGACCATTCTCGGGGCATGGTTGTACTGGTATGACCGCAAC 237390 Query 19556 GTCGAGCGCATCGACCTGTACAAGCCGCTCGATGACTGGGGGTGGTCGAACACTAACGAC 19615 ||||| ||| | | | || || ||||| |||||| |||| |||||| Sbjct 237389 GTCGAAGAGATC----------ATCTCCCCGGTG--TGGGGCTGGTCGGACACCAACGAC 237342 Query 19616 GTCGCGACGTCGAATCACCTGTCGGGCACTGCCGTCGACCTCAACGCCACCCAGTACCCG 19675 ||||| | |||||||||||| ||||||| ||||| ||| ||||||| ||||||||||| Sbjct 237341 GTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTGGACATCAACGCACCCCAGTACCCG 237282 Query 19676 TGGGCGCGGCGCGTGATGCCGGCCGATCGCATCGCGAAGGTGCGTCGAGGCCTGGCCTTG 19735 |||| || ||||| | ||||||||| || || || ||| || | Sbjct 237281 TGGGGTGCACGAACCATGCCCAGCACTCGCATCGCCAAAGTCCGCGAAGGACTTAAGCTC 237222 Query 19736 TTCGAGGGCAACATCTTCTGGGGCGCCGACTGGTCACGCGCGGACGAGATGCACTACCAG 19795 || |||||| ||| |||||| || |||||| ||||| ||||| |||||||||||| Sbjct 237221 TTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAACCGCGCCGACGAAATGCACTACCAG 237162 >seq234526 Length=1326 Score = 109 bits (120), Expect = 2e-19 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 35752 GGACCGGAGCTGCTCGCCGCTGCGGTCCTCGAATCCCAGCGCGTCATCGAGCAGCGCGAG 35811 || ||||||||||| || || |||||||||||||| ||| ||||||||||||||||| Sbjct 263 GGGCCGGAGCTGCTGGCAGCCGCGGTCCTCGAATCGCAGAAGGTCATCGAGCAGCGCGAC 204 Query 35812 GCCCGCATCCACCAGCTCGAGCGCGTGGTCACCGACCAGGCGCCGAAGGTCACCTACGTC 35871 |||||||||| ||||| |||| | | || ||| | | || ||||||||| ||| || Sbjct 203 GCCCGCATCCTGCAGCTGGAGCACAAGATCGCCGCCGACGCCCCGAAGGTCGGGTACATC 144 Query 35872 GAC 35874 ||| Sbjct 143 GAC 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160302953442048