Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031237.1 Length=49286 Score E Sequences producing significant alignments: (Bits) Value seq216857 279 2e-70 seq276562 138 4e-28 seq311842 96.9 1e-15 SEQ84541 82.4 2e-11 >seq216857 Length=94037 Score = 279 bits (308), Expect = 2e-70 Identities = 471/685 (69%), Gaps = 24/685 (4%) Strand=Plus/Plus Query 3317 TGGTCGACGTCCCCGCGACGCCGGTCCTCGCGACCATCCCTCGTGTCGAGCTCGGCTCGG 3376 |||| || || |||| | |||| |||||||| ||||| |||| ||| ||| || | Sbjct 33313 TGGTAGAAGTTCCCGAAGCCCCGGCGCTCGCGACAATCCCGAGTGTTGAGATCGCTTCCG 33372 Query 3377 TCGGCACCTGGAACATCTCGAACATCGCC--GGA-TGGCATCCGACCGCCGAGGACTTCG 3433 | || |||||||||||||||| ||| ||| ||||| || | |||||| || | | Sbjct 33373 TTGGGTACTGGAACATCTCGAAC---GCCATGGACTGGCACCCCAGCGCCGACGATCTAG 33429 Query 3434 CCTCCGCGGTCGCCGCGCTCGACTGCCCTGCGGTACGACGCCCGGTCCTCAAACCCGGAC 3493 | | || |||||||||||||||||||| || || || || ||||| ||||| ||| | Sbjct 33430 CGGCGGCCGTCGCCGCGCTCGACTGCCCGGCAGTGCGCCGGCCGGTGCTCAAGTTCGGGC 33489 Query 3494 ACTCCGACGGTCCCGGAGA------CCCGACGATAGGGCTCGTCGACAATCTCGCAATCA 3547 | | | || || || || |||| | || ||||||||||| | | || Sbjct 33490 ATACAGGCGAACCGGGCGAGGGCGACCCGTCTATCGGGCTCGTCGATGCTTTGCGTCTCT 33549 Query 3548 CCGACGACGGGCAGACCCTCGTCGGCGACTTCGTCGGTGTGCCAGCGTGGCTCGCCACCG 3607 |||| ||||||||||| || |||| |||| |||||||| ||| ||| | ||| ||| Sbjct 33550 CCGAGGACGGGCAGACGCTTCTCGGGGACTATGTCGGTGTCCCAAGCTGGTTGGCCGCCG 33609 Query 3608 CCGACACCGAAGGCCGCTCGGTCATCGCATCGGCCTATGCCGACCGGTCGGGCGAGTGGG 3667 ||||| | || ||||| ||||||||||| ||||| ||| ||||||| || || |||| Sbjct 33610 CCGACTCTGAGGGCCGGTCGGTCATCGCGTCGGCATATCCCGACCGCTCTGGTGAGTTCC 33669 Query 3668 AACACAACTACGTGTGCCAGCTCGGCCACACCCACCCGTTCGTGCTGNNNNNNNNNNNNN 3727 | | | |||||||||||||||||||||||||||||||||||||| | Sbjct 33670 AGCGCGACTACGTGTGCCAGCTCGGCCACACCCACCCGTTCGTGGTACACGCTGTCGCGC 33729 Query 3728 NNNNNNNNNNNNNNNNNNNNNNNNNNGGAACTCTCGAATCCCTGTACGACCTGTACGCCA 3787 || ||||||||||| || |||||||| ||| ||| Sbjct 33730 TGCTCGGCGTGATGCGGCCCGGAATCGGCACTCTCGAATCGCTATACGACCTCTACACCA 33789 Query 3788 AAGC-GCCGCAGGAGAAGGAGAAGGCCATGGCCTCAACAGCTCTGGCGTCCGTGACCGTC 3846 | || ||| | || |||||| ||||||||| || || || ||| || |||| Sbjct 33790 AGGCACCCGAAACAG-AGGAGACCGCCATGGCCGGAATCGCCGCAGCAGCCG-GAACGTC 33847 Query 3847 GATC----AGGTGC-GCGCCGCGTACTACAACGGTCCAGCCGCCACCAACTACAACCTGT 3901 |||| | || | |||| | |||||| |||| | ||| | ||| | ||| Sbjct 33848 GATCGACGACGTTCGGCGCAAC-TACTACGACGGCC---CCGGAAAACACTGGGCCTTGT 33903 Query 3902 GGATTCGGGAGATGCTCGTCGACCCGCCGCAGCTAATCGTGCAGAACGACGCCGACAGCA 3961 ||||||| |||||| || ||||||| || | || || ||||||||||||| ||| | Sbjct 33904 GGATTCGCGAGATGTTCATCGACCCTGCGGAACTCATTGTGCAGAACGACGAAGACGACT 33963 Query 3962 CGCTGCTGAAGGTGCCGTTCACCGT 3986 |||||||| |||||||| |||||| Sbjct 33964 CGCTGCTGCGGGTGCCGTACACCGT 33988 Score = 178 bits (196), Expect = 4e-40 Identities = 218/298 (73%), Gaps = 1/298 (0%) Strand=Plus/Plus Query 2832 TCGGCGCCGCGATCGCCTACCACGACAACATGATNNNNNTCGCCGGTCTCGCCCACTTCC 2891 ||||||| ||||||| ||||||||| || ||| | | | | || ||||||| Sbjct 32823 TCGGCGC-GCGATCGAGTACCACGACCACCAGATGGCGCTGGTTGCGTTGGCGCACTTCC 32881 Query 2892 TCAACCTCGAGGGCAAGGGCGGCTCGTACGCGCTGGCCAGCGTCCAGGAGCACACGTTCT 2951 | || || || ||||||||||| || || |||||||| |||||||||| |||||||| Sbjct 32882 TGAATCTGGACGGCAAGGGCGGTTCCTATGCGCTGGCGAGCGTCCAGGCCGACACGTTCG 32941 Query 2952 CCCAGTCGGTGCAGACCGTCGGCGAGCAGACCCGCGACATCGGCAACGCGCACGTGATCG 3011 ||||| ||||| || |||| ||| | | |||||| | | | || ||| | | | Sbjct 32942 TGCAGTCCGTGCAAACGGTCGCCGATGACATCCGCGATACAGCGCAGGCCCACATCGTTG 33001 Query 3012 AGGACCTCGTCGACATCAACTTCGGTCTCGACGAGCAGGCTCCGCTGCTGGTGTTCGACG 3071 | |||||||| |||||||| |||||| || || | || || ||||||| | ||| | Sbjct 33002 AAGACCTCGTTGACATCAATTTCGGTGAGGATGAACCCGCGCCCTTGCTGGTATGCGATG 33061 Query 3072 AGATCGGCTCCCACCAGACCGCCACCGCCGCGGCGCTGAAGATGCTCGTCGAAGCCGG 3129 | || ||||||| |||| ||||||||| ||||||||| | ||||||||| | || || Sbjct 33062 AAATTGGCTCCCGCCAGGACGCCACCGCAGCGGCGCTGCAAATGCTCGTCAACGCAGG 33119 Score = 149 bits (164), Expect = 2e-31 Identities = 311/461 (67%), Gaps = 27/461 (6%) Strand=Plus/Plus Query 2048 TTCGAGCGTGTCCCTGACCTGCAGTGGCCGGCGTCGGTGCAGACGTTCTCGCGGATGCTC 2107 |||||||| | | |||||| |||||| |||||| ||||| | |||| ||| || Sbjct 31987 TTCGAGCGGACCACAGACCTGATCTGGCCGCTATCGGTGTGGACGTACACGCGCATGGTC 32046 Query 2108 CGCGAGGACTCGCGGGTGTCGTCGCTTTTGGCGGCGATTACGCTGCCGATCCTGCGGGCG 2167 ||||||||| | || | | ||| | | || || ||||||||||| || | Sbjct 32047 CGCGAGGACGCCCGAATTGCATCGGTACTCAGAGCTGTTGGGCTGCCGATCCGCCGCACC 32106 Query 2168 CAGTGGCGGATCGCGCCGAACGGCGCCCGGGACGAGGTCGTCGAGTTCGTGGCCCGCAAC 2227 |||||| ||| || ||||| ||| | |||||||| ||||| ||||| || || ||| Sbjct 32107 ACGTGGCGTATCCGGCGCAACGGTGCCAGTGACGAGGTTGTCGAATTCGTCGCGCGAAAC 32166 Query 2228 ATGCGGTTGCCGATCGATGGCGCCGAGG---ACGAA---------CTGAACTACGGCCGG 2275 | | | || ||||| |||||||||| |||| | ||| | | || Sbjct 32167 CTCGGACTTCCCATCGAGGGCGCCGAGGGCACCGAAGACAAGAACCCGAAATCCACGCGT 32226 Query 2276 TCGAAAGGCCGGTTCTCGTGGAAGCATCACCTCCCGCAGGCGCTCACCGCTCTGCCGTAC 2335 | ||||| ||||| ||| | | ||||| | |||||| |||| | |||| ||| Sbjct 32227 ACTCGCGGCCGATTCTCATGGGACAAGCACCTACAGCAGGCACTCATGTCCCTGCGATAC 32286 Query 2336 GGGCACAGCGTGTTCGAGCAGGTGTACC---GCGAGGAGAACGGC----AAGTTC----- 2383 |||||| ||||||||||||||||| | ||||| | ||| ||| | Sbjct 32287 GGGCACGCGGTGTTCGAGCAGGTGTATCAGATCGAGGGCGAGGGCCCGGAAGCCCGAGCG 32346 Query 2384 TGGCTACGCAAGCTCGCTCCGCGACCGCAGCGCACCATCTCGAACTGGAACGTCGCGCTC 2443 ||| |||||||| ||||| || || || ||| |||||||| ||||| || || | | Sbjct 32347 GTGCTGCGCAAGCTTGCTCCACGTCCCCAAGCCACGATCTCGAAATGGAATGTGGCCCGC 32406 Query 2444 GACGGTGGGCTGATGTCGATCGAGCAG--GCCGCGCCGGCG 2482 ||||| ||||| | |||||||||||| ||| |||| ||| Sbjct 32407 GACGGCGGGCTCGTATCGATCGAGCAGCAGCC-CGCCAGCG 32446 >seq276562 Length=247471 Score = 138 bits (152), Expect = 4e-28 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18304 TGGGGATGGTCGAACACCAACGACGTCGCGACGTCGAATCACCTGTCGGGCACCGGGGTC 18363 ||||| |||||| |||||||||||||||| | |||||||||||| ||||||||| || Sbjct 237365 TGGGGCTGGTCGGACACCAACGACGTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTG 237306 Query 18364 GACCTCAACGCCACCCAGTACCCGTGGGGGCGGCGCGTCATGCCGGCCGACCGCATCGCG 18423 ||| ||||||| |||||||||||||||| || |||||| | |||||||| Sbjct 237305 GACATCAACGCACCCCAGTACCCGTGGGGTGCACGAACCATGCCCAGCACTCGCATCGCC 237246 Query 18424 AAGGTCCGGCGCGGTCTCGCCCTGTTCGAGGGCAACATCTTCTGGGGCGCCGACTGGTCG 18483 || ||||| || || || || |||||| ||| |||||| || |||||| Sbjct 237245 AAAGTCCGCGAAGGACTTAAGCTCTTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAAC 237186 Query 18484 CGGGCAGACGAGATGCACTACCAG 18507 || || ||||| |||||||||||| Sbjct 237185 CGCGCCGACGAAATGCACTACCAG 237162 >seq311842 Length=41669 Score = 96.9 bits (106), Expect = 1e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 42637 CGGCCACGACCTCGTGTGCTGGTGCCCGACCGACCAGCCGTGCCACGCCGATGTGCTGCT 42696 |||||||||||||| ||||||||||||| ||||||||||||||| ||||| || ||||| Sbjct 9645 CGGCCACGACCTCGCGTGCTGGTGCCCGCTCGACCAGCCGTGCCATGCCGACGTACTGCT 9704 Query 42697 CGAGATCGCGAAC 42709 ||| ||||| ||| Sbjct 9705 CGAAATCGCCAAC 9717 >SEQ84541 Length=60354 Score = 82.4 bits (90), Expect = 2e-11 Identities = 162/238 (68%), Gaps = 15/238 (6%) Strand=Plus/Minus Query 14948 GCGAACAACGCGGTCCCTGAGTCGCTGAAGTTCCCGCACGACGAAGTGGGCTCCGACCAC 15007 |||||| | |||| || || ||| ||| | || | | |||| ||||| |||||| Sbjct 4429 GCGAACTCCTCGGTTCCCGACTCGATGATGCTCGCCAATGACGGTGTGGGACATGACCAC 4370 Query 15008 GACTCGATCGGTCTGTTCCAGCAGCGGCAGGCAGGGTGGGGGACCGTCGCCGACCGGATG 15067 |||||| | |||| |||||||||||| || | | ||||| || ||||| |||| Sbjct 4369 GACTCGGTGGGTCCGTTCCAGCAGCGTCA---AAGCTGGGGTGCCACAGCCGATTTGATG 4313 Query 15068 GATCCGCACCGCTCGGCGGCGATGTTCTTCGACGCCCTGATGAAGGTTCCCGGCTGGGAA 15127 || ||| | ||||||| | ||| | |||| || ||||||| | |||||| | Sbjct 4312 GACCCGGCGAGGTCGGCGGGCAAGTTTTACGACCAGTTGGTGAAGGTGTCGGGCTGGCA- 4254 Query 15128 ACGATGGACATG---GGTGCC---GCGGCACAGGCGGTGCAGCGCAGCGCCTTCCCCG 15179 ||||||| | |||| || || ||| |||| |||||| |||||||||| Sbjct 4253 -----GGACATGAGCGTTGCCCAAGCCGCGCAGTCGGTTCAGCGCTCGGCCTTCCCCG 4201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156925336946688