Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031239.1 Length=59337 Score E Sequences producing significant alignments: (Bits) Value seq219601 152 2e-32 seq324286 125 3e-24 SEQ71073 118 4e-22 seq298506 107 7e-19 >seq219601 Length=2178 Score = 152 bits (168), Expect = 2e-32 Identities = 259/371 (70%), Gaps = 17/371 (5%) Strand=Plus/Minus Query 12062 CGACTACCGGTACTTTCACCAGGGCGTCGTCCCGACGACCGACGGC---GATCTGCCGGT 12118 || |||| |||||| || ||||||||||| | ||||||| || |||||||| Sbjct 1989 CGGCTACGCGTACTTCCATCAGGGCGTCGTGCGTCTCTCCGACGGTACGGACCTGCCGGT 1930 Query 12119 CGGGCACCTGACGCTCGGCACCGGGCATGCTGGCGCCGGGAACATCAACG---------C 12169 |||| | || || || || |||||||| || ||| | || | || | Sbjct 1929 CGGGAAGCTCACCCTGGGTACCGGGCACGCCGGCACAGGCCCCGGTGTCGGGGCGCGGGC 1870 Query 12170 GGCCGCCGAGCACTACGACAACACTGGCGCTCAGGTCGCGTCGGTGCGGGTCGGCGAGGA 12229 |||||||| ||||||||||||||| || | ||| || ||| || ||||||||| Sbjct 1869 GGCCGCCGCGCACTACGACAACACCGGTACGGCGGTGGCCGTGGTCCGCTGCGGCGAGGA 1810 Query 12230 CGCGCACGGTATTTGGTTCGCCGGCCGCACGGTGCC-GACGACCGACGACCTGCAGCGGC 12288 | ||||||| || ||| ||||||| | ||| || | | || || ||| || || Sbjct 1809 CCCGCACGGGATCTGGGTCGCCGGGAAGATGGTCCCCGGCCAC-GAGGACGA-CATCG-- 1754 Query 12289 AGACGCTGCGCCGGTCGTCGCTGTCGGGTGACTGGCGCAAGGTGAACGGCCAGTACGAAC 12348 | ||||||||||| || || | || || ||||||||| | |||||| |||||||| Sbjct 1753 ATACGCTGCGCCGCTCCGCGATCTCCGGAGACTGGCGCGGCATCAACGGCTCGTACGAAC 1694 Query 12349 TGGTCGCGGCGCTCGCGGTCAACGTGCCCGGATTCCCGATCCCGCGGACCGAATCGCTCG 12408 | ||||| || || ||||| |||||||| |||||| | ||||||||| || ||| Sbjct 1693 TCGTCGCTGCCCTGTGCGTCAATGTGCCCGGCTTCCCGGTGCCGCGGACCACCGCGGTCG 1634 Query 12409 TCGCGTCCGGT 12419 |||||||||| Sbjct 1633 CCGCGTCCGGT 1623 >seq324286 Length=1290 Score = 125 bits (138), Expect = 3e-24 Identities = 310/460 (67%), Gaps = 20/460 (4%) Strand=Plus/Plus Query 8668 GAGGTGTCTGACCGGCTGCGTATCTGGCCCGCTGGTGCGTTCGAGGACATCCGCCCGGAA 8727 |||||| ||||||||| |||||||| || || |||| ||| | | || || || Sbjct 649 GAGGTGCACGACCGGCTGGTGATCTGGCCGGCCGGCGCGTGGGAGCAGCTGCGGCCCGAG 708 Query 8728 CTGCTCGAATCGCTGTCGGATGCGGTGACCATCGACGAGATGACCGAGCGCGTCGGGCGG 8787 |||| || || ||| |||| |||| | ||||||||| || || || |||| | Sbjct 709 CTGCAGGAGTCCCTGGCGGAGGCGGAGGGCATCGACGACGCGAAGGACCGGATCGGTGAG 768 Query 8788 GTGCTGAACATCGAC-GCGAAGTCGCGGAA--ACTGCGGGCGCAAATCAACGACGTCGAG 8844 |||||| |||| || |||| | | ||||| | |||| |||| ||||||| ||||| Sbjct 769 GTGCTGGGCATCAACAGCGA-GACACGGAAGAAACGCGGCCGCA--TCAACGAGATCGAG 825 Query 8845 GCGCAGCTCGCCGACCCCNNNNNNNNNCCCGCAGACCGGCCGGCGCTCA-CACAGTGGCG 8903 || |||| |||| | | |||||| | | |||| | | | | | Sbjct 826 CGGCTACTCGACGACGACGAGCTGGATCAGTTCGACCGGTCCGACCTCATCGCGGAGAAG 885 Query 8904 GCGCGACCTGTGGGAGCAACACGACGAGTCGCTGAACGAGTGGCAGTGGAAGGCACGCCG 8963 ||| | |||||| | |||||||||||| || |||||| |||||||||| ||||| Sbjct 886 TCGC-AGCTGTGGCGTGAGCACGACGAGTCGTTGGGGGAGTGGGAGTGGAAGGCCCGCCG 944 Query 8964 CATCGCCCGGACGGAGTCACACGGCGCGGTGTCGGCCGGTCAGCTCGCCGCGGCGCGCGT 9023 |||||| || || ||| || ||||||||| || ||| ||| || ||||| |||| Sbjct 945 CATCGCGCGCACCGAGGTGCAGGGCGCGGTGGAGGGCGGGCAG---GCGGCGGC-CGCGG 1000 Query 9024 GGTCGAGCAGCAGAC-----CGGGC-TACGCATGTGGAAACGGTGGCTGTCGACCGAAGA 9077 | || | || ||| ||||| | | ||||||||||| |||||||| ||| || Sbjct 1001 AGGCGTAC-GC-GACCGCGTCGGGCGTGCAGATGTGGAAACGCTGGCTGTCCACCCCCGA 1058 Query 9078 TCAACGCACCCGCGCATCGCATCGTGTGGCCGACGGCCAG 9117 | || ||||| |||| | || |||||||| ||| Sbjct 1059 CGATCGAACCCGGTTCACGCACAGGGTCGCCGACGGGCAG 1098 >SEQ71073 Length=1463 Score = 118 bits (130), Expect = 4e-22 Identities = 178/252 (71%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 1954 TGGCACGAGGACGACCTCGCCGGCCGGCTACTCGCCCGCGACGGCCGCGTCGAGGACGGC 2013 ||||| |||||||||||||||||||||| ||| | ||||| || ||||||||| Sbjct 370 TGGCATCAGGACGACCTCGCCGGCCGGCTCCTCAAGGAGCAAGGCCGGGTGGAGGACGGC 429 Query 2014 GGCAAGTGGATCGTTGTGCACCTGCCGGCGATCGCGATGCTGGAGGACCGGGTACGCGGT 2073 ||| |||| || | ||||||||||||||||| | ||||| | | ||||| Sbjct 430 GGCCTGTGGCGGGTGATCCACCTGCCGGCGATCGCCGTCGCCGAGGATCACGATCGCGGC 489 Query 2074 ATCTATGCTGACCCGCTCGGCCGGGCGCCGGGCGAACCGCTCACGCACCCGCTGCTCGAC 2133 |||| | || ||||||||||| | |||||| |||||| | |||||||| | | | Sbjct 490 TTCTACACGGATCCGCTCGGCCGCGAGCCGGGAGAACCGTTGCCGCACCCGAAGAT---C 546 Query 2134 CCGGAC---GACGTCGACGGGCTGCTCGCGTGGTGGGCGGAGAAACGGGCGATGTCGACC 2190 |||||| ||| | | || ||| || || |||||| || || || | | | ||| Sbjct 547 CCGGACGGGGACCTGGGCGCGCTCACCGAGTACTGGGCGAAGCGGCGAGCCAAGACCACC 606 Query 2191 GCGCGTGACTGG 2202 || || |||||| Sbjct 607 GCCCGCGACTGG 618 Score = 95.1 bits (104), Expect = 5e-15 Identities = 193/280 (69%), Gaps = 14/280 (5%) Strand=Plus/Plus Query 2503 GAGAAGAACTACGGCGGCGGCATGACGAAGGTGCTGATCCAGCAGGCGTGGGCCGACCTG 2562 |||||||||| |||||| | |||| ||||| ||| ||| ||||||||||| | ||| Sbjct 904 GAGAAGAACTTCGGCGGGGACATGGCGAAGACCCTGGTCCGGCAGGCGTGGGATCAGCTG 963 Query 2563 CAGCGCGA-GGGCGACATACCGGCGTCGGAGAACTGCC--CGCACGTGACGGGCGTATCG 2619 || || ||||| | |||| ||| | |||| ||| ||| | || | Sbjct 964 GCTCGTGATGGGCGGG-TGCCGGA--CGGGAAGTTGCCGCCGCGGGTGCGTGAGGTGGTG 1020 Query 2620 GCGCGTGTGTCGAAGGTGCTGCGCGCCGAACCGATCGCGCAGGCTGTGCTCACTGAC--- 2676 || || |||||||||||||||||||| |||||||||||||| | |||| ||| Sbjct 1021 GCCCGCCGTTCGAAGGTGCTGCGCGCCGAGCCGATCGCGCAGGC---GATCAC-GACGGG 1076 Query 2677 -CGCGTGTACTTCGCGCAGCTCGCCGACCTGACGAACCTGACGAATGAATGGCGGCTGTG 2735 || | | | ||| || || | | ||||||| ||| | || ||| | |||| Sbjct 1077 GCGGGCGAAGTTCCTGCGGCCGGGGAATCTGACGACGTTGAAGGCGGAGTGGACGATGTG 1136 Query 2736 GCAGCCCGGTTCGACGTGGTCGCCGGGTGCGCTCGACGCG 2775 | ||| || ||||||||||||||||| ||||| || ||| Sbjct 1137 GTCGCCGGGGTCGACGTGGTCGCCGGGCGCGCTGGATGCG 1176 >seq298506 Length=3114 Score = 107 bits (118), Expect = 7e-19 Identities = 122/163 (75%), Gaps = 7/163 (4%) Strand=Plus/Minus Query 16922 GGTGGCG-CCACCACCGCCAACCAGCTGCCCACCAGCGTCAAGGTGATGGTGTGGCCGGA 16980 |||| || |||||||||| ||| | |||| |||||||||| || | | ||| Sbjct 1715 GGTGCCGACCACCACCGCGTACCCG------ACCACCGTCAAGGTGCTGATCTACGCGGC 1662 Query 16981 GGGCACGATCGTTCGAGGCCGCGGCGACATCATCAACATGGAAGCGATCTACGACTCCGC 17040 ||||| || || |||||||||||| | |||| | |||| | |||||||||||| | Sbjct 1661 CGGCACCTGGGTCCGTGGCCGCGGCGACGTGATCAGCCTGGACACCATCTACGACTCCAC 1602 Query 17041 GGGACTCGAAACGAACGACTTCCTGCGGCTGTTCATGGAAGAG 17083 || ||||| |||||||| |||||||||||||||||| ||| Sbjct 1601 CGGCCTCGAGGTGAACGACTACCTGCGGCTGTTCATGGAGGAG 1559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188952151470144