Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031251.1 Length=47880 Score E Sequences producing significant alignments: (Bits) Value seq216857 114 4e-21 seq234526 109 2e-19 >seq216857 Length=94037 Score = 114 bits (126), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 3/134 (2%) Strand=Plus/Plus Query 3960 GAGGTCAATGGAGGAAAGGAGGCCATCACCATGGCCACCCTGAATGAGGGCCTCGCGGAG 4019 |||||||| |||||||||| ||| || |||||||||| |||||||||||| || Sbjct 34140 GAGGTCAACCAAGGAAAGGAGCACATTG---TGCCCACCCTGAAAGAGGGCCTCGCGCAG 34196 Query 4020 CGCCTCGGCATCCCCGCCGACGCCGACGACGAGACCATCCTGTCCGCGGTCGACGAGGCG 4079 |||||||| |||||||||| ||||||||||||| || ||| |||||||||| Sbjct 34197 AAGCTCGGCATTTCCGCCGACGCGGACGACGAGACCACATTGCAGGCGCTCGACGAGGCT 34256 Query 4080 CTCGCCGAGCGAGC 4093 ||||||||||| || Sbjct 34257 CTCGCCGAGCGCGC 34270 Score = 96.9 bits (106), Expect = 1e-15 Identities = 281/426 (66%), Gaps = 24/426 (6%) Strand=Plus/Plus Query 1999 TGGCCGCTGTCGGTACGCGTGTTCGAGCAGATGCGGCGCCAGGACGCCCAGATCACGTCA 2058 |||||||| ||||| | || | || ||| ||| ||||||||| || | || Sbjct 32011 TGGCCGCTATCGGTGTGGACGTACACGCGCATGGTCCGCGAGGACGCCCGAATTGCATCG 32070 Query 2059 GTGCTGCGCGCCGTGATGCTGCCGGTGCGCCGCACGAAGTGGCGTCTCGACCCCGCCGAC 2118 || || | || || ||||||| | |||||||| | ||||||| || | | || Sbjct 32071 GTACTCAGAGCTGTTGGGCTGCCGATCCGCCGCACCACGTGGCGTATCCGGCGCAACGGT 32130 Query 2119 GCGCGCCCCGAGGTCGTGGAGCACATCGCCAACGACCTCGGCCTGCCGGTCAAGGGCGGC 2178 || | |||||| || || | |||| ||||||| || || || |||||| | Sbjct 32131 GCCAGTGACGAGGTTGTCGAATTCGTCGCGCGAAACCTCGGACTTCCCATCGAGGGCGCC 32190 Query 2179 GAGGAGCAGGTATCGCGGG--CCCGA--------CGCAGGCGCGGCCGGTTCTCGTGGGA 2228 |||| ||| | | | ||||| || | |||||||| ||||| ||||| Sbjct 32191 GAGG-GCACCGAAGACAAGAACCCGAAATCCACGCGTACTCGCGGCCGATTCTCATGGGA 32249 Query 2229 AGAGCACCTGCAGCTTGCGCTCCTGTCAATCCAGTACGGGCACATGTTCTTCGAGCAGGT 2288 ||||||| |||| || ||| |||| | | ||||||||| | | ||||||||||| Sbjct 32250 CAAGCACCTACAGCAGGCACTCATGTCCCTGCGATACGGGCACGCGGTGTTCGAGCAGGT 32309 Query 2289 GTA-CAGCCTCGGCGACGACGGCCTGTA--CC-------ACCTGCGCAAGCTCGGCCCCC 2338 ||| ||| ||| | ||| |||| | | || ||||||||||| | || | Sbjct 32310 GTATCAG-ATCGAGGGCGAGGGCCCGGAAGCCCGAGCGGTGCTGCGCAAGCTTGCTCCAC 32368 Query 2339 GTATGCCGCGCACCATCTCCGACAT-CAAGGTCGCCCGCGACGGCGGACTCGTCGCGATC 2397 || | ||| |||| ||| || || || |||||||||||||| ||||| ||||| Sbjct 32369 GTCCCCAAGCCACGATCT-CGAAATGGAATGTGGCCCGCGACGGCGGGCTCGTATCGATC 32427 Query 2398 GAGCAG 2403 |||||| Sbjct 32428 GAGCAG 32433 Score = 87.8 bits (96), Expect = 5e-13 Identities = 194/287 (68%), Gaps = 12/287 (4%) Strand=Plus/Plus Query 2764 TACCACGACGAGCAGATCGGGCGCGCCGTGCTCGCGCACTTCCTCAACCT---CGGCACG 2820 ||||||||| | ||||| | || | | | | ||||||||||| || || ||||| Sbjct 32839 TACCACGACCACCAGATGGCGCTGGTTGCGTTGGCGCACTTCCTGAATCTGGACGGCA-- 32896 Query 2821 CAGACCGGTTCGTGGGCGCTCGGATCGA-CGTTC--GCCGACTTCTTCGTGCTGTCGCTG 2877 || |||||| | ||||| | ||| ||| | |||||| ||||||| ||| || Sbjct 32897 -AGGGCGGTTCCTATGCGCTGG---CGAGCGTCCAGGCCGACACGTTCGTGCAGTCCGTG 32952 Query 2878 CAGACGCTGGGCGAGCAGATCGCCGACGTGGCGAACCAGCACATCGTCGAAGACCTTGTC 2937 || ||| | | ||| | ||| ||| ||| | |||||||| |||||||| || Sbjct 32953 CAAACGGTCGCCGATGACATCCGCGATACAGCGCAGGCCCACATCGTTGAAGACCTCGTT 33012 Query 2938 GACGCGAACTGGGGACCCGAAGAACCCGCACCTCGACTGGTGTTCGACGAGATCGGCTCC 2997 ||| || | || || |||||||| || ||||| | ||| || || |||||| Sbjct 33013 GACATCAATTTCGGTGAGGATGAACCCGCGCCCTTGCTGGTATGCGATGAAATTGGCTCC 33072 Query 2998 CGCAAGGACGCCGTCGCGTCGGCATTGAAGCTCCTCGTCGACGCCgg 3044 ||| |||||||| ||| |||| || | | |||||| |||| || Sbjct 33073 CGCCAGGACGCCACCGCAGCGGCGCTGCAAATGCTCGTCAACGCAGG 33119 >seq234526 Length=1326 Score = 109 bits (120), Expect = 2e-19 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 32875 GGACCGGAGCTGCTCGCCGCTGCGGTCCTCGAATCCCAGCGCGTCATCGAGCAGCGCGAG 32934 || ||||||||||| || || |||||||||||||| ||| ||||||||||||||||| Sbjct 263 GGGCCGGAGCTGCTGGCAGCCGCGGTCCTCGAATCGCAGAAGGTCATCGAGCAGCGCGAC 204 Query 32935 GCCCGCATCCACCAGCTCGAGCGCGTGGTCACCGACCAGGCGCCGAAGGTCACCTACGTC 32994 |||||||||| ||||| |||| | | || ||| | | || ||||||||| ||| || Sbjct 203 GCCCGCATCCTGCAGCTGGAGCACAAGATCGCCGCCGACGCCCCGAAGGTCGGGTACATC 144 Query 32995 GAC 32997 ||| Sbjct 143 GAC 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152445215444352