Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031253.1 Length=77832 Score E Sequences producing significant alignments: (Bits) Value seq311842 239 2e-58 seq216857 208 4e-49 seq138175 192 3e-44 >seq311842 Length=41669 Score = 239 bits (264), Expect = 2e-58 Identities = 260/345 (75%), Gaps = 0/345 (0%) Strand=Plus/Plus Query 52013 ATGAGTGACCGATCCGGCATTGAGTGGACCGACGCCACGTGGAACCCCGTAACGGGGTGC 52072 ||| ||||| ||||||| || |||||||| ||||||||||| |||||||| || ||| Sbjct 7760 ATGGGTGACAAGACCGGCATCGAATGGACCGATGCCACGTGGAATCCCGTAACCGGCTGC 7819 Query 52073 AGCGAGGTGTCACCAGGTTGTGATCGGTGCTACGCCAAGGCATTTGCTGAGCGGTTCCGC 52132 | | ||||| || || || || | ||||||||| || | || || ||||| | ||| Sbjct 7820 GACAAAGTGTCTCCCGGCTGCGACCACTGCTACGCCGAGACGTTCGCCGAGCGCTGGCGC 7879 Query 52133 GGCACCGAGGGTCACTACTACCAGCGCGGGTTCGACGTGGTGTTGCGACCGGAGAAGCTG 52192 |||||||| || ||||||| | ||||||||||||| || | |||||||||| ||||| Sbjct 7880 GGCACCGATGGCCACTACTTCGAGCGCGGGTTCGATGTCCAGCTGCGACCGGACAAGCTC 7939 Query 52193 GACCAGCCCATCCGGTGGACCCGGCCGCGCCTGGTGTTCGTCAACAGCATGGCCGACCTG 52252 | || ||| | || |||||| |||||| ||||||||||||| ||| | |||||| Sbjct 7940 GGCCTGCCGTTGCGCTGGACCAAACCGCGCAAGGTGTTCGTCAACTCGATGTCAGACCTG 7999 Query 52253 TTCCACCAGGCGGTCCCCGATGACTACATCGCCCGGGTGTTCGCCGTCATGGCCCAAGCG 52312 |||||| | ||| || || || ||||| ||| |||||||| || ||||| ||| Sbjct 8000 TTCCACGACAAGGTGCCTGACGAGTACATAGCCGAAGTGTTCGCAGTAATGGCATGCGCG 8059 Query 52313 CCACAGCACACGTTCCAGCTGCTGACCAAGCGTCACGCGCGGATG 52357 || |||||||||||||| || |||||||| || | ||| ||| Sbjct 8060 TATCAACACACGTTCCAGCTACTCACCAAGCGGCATGGGCGAATG 8104 Score = 102 bits (112), Expect = 4e-17 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 60503 CGCGCCGAGCTACGCGGCCGCGACCTGGCCTGCTGGTGCCGACTCGACCAGCCGTGCCAC 60562 ||||||||||| ||||||| |||||| || |||||||||| ||||||||||||||||| Sbjct 9631 CGCGCCGAGCTGCGCGGCCACGACCTCGCGTGCTGGTGCCCGCTCGACCAGCCGTGCCAT 9690 Query 60563 GGCGACGTGCTGCTGGCCATCGCCAA 60588 | |||||| ||||| | |||||||| Sbjct 9691 GCCGACGTACTGCTCGAAATCGCCAA 9716 Score = 95.1 bits (104), Expect = 6e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 52604 ATTGATTGGGTCGTGGTGGGTGGCGAATCCGGTACGGGCGCAAGGCCGATGCATCCCGAG 52663 || || ||||| | || || |||||||| || | ||||||||||| || || || || Sbjct 8429 ATCGACTGGGTGATCGTCGGCGGCGAATCAGGCCCCGGCGCAAGGCCAATACACCCAGAC 8488 Query 52664 TGGGCGCGGTCGCTTCGTGACCAGTGCGCCGCGGCCAAGGTGCCGTTCCTGTTCAAGCAG 52723 |||||||| || | || ||||| |||| || || ||||||||||||||||||||| Sbjct 8489 TGGGCGCGCTCATTGCGCGACCAATGCGTAGCCGCTGGCGTGCCGTTCCTGTTCAAGCAG 8548 Query 52724 TGGGG 52728 ||||| Sbjct 8549 TGGGG 8553 >seq216857 Length=94037 Score = 208 bits (230), Expect = 4e-49 Identities = 246/333 (74%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 52028 GGCATTGAGTGGACCGACGCCACGTGGAACCCCGTAACGGGGTGCAGCGAGGTGTCACCA 52087 || || || ||| |||||||||||||||| || | ||||| ||| | |||| || || Sbjct 17898 GGAATCGAATGGGCCGACGCCACGTGGAATCCGATCACGGGCTGCGACAAGGTATCTCCC 17957 Query 52088 GGTTGTGATCGGTGCTACGCCAAGGCATTTGCTGAGCGGTTCCGCGGCACCGAGGGTCAC 52147 || || |||| ||||||||| || | || || ||||| | ||||||||||| || ||| Sbjct 17958 GGCTGCGATCACTGCTACGCCGAGACGTTCGCCGAGCGCTGGCGCGGCACCGATGGCCAC 18017 Query 52148 TACTACCAGCGCGGGTTCGACGTGGTGTTGCGACCGGAGAAGCTGGACCAGCCCATCCGG 52207 |||| | || ||||||||||||| | |||| || || ||||| ||| ||| | || Sbjct 18018 TACTTCGAGAACGGGTTCGACGTGCAGCTGCGGCCCGACAAGCTCGACTTGCCGCTTCGC 18077 Query 52208 TGGACCCGGCCGCGCCTGGTGTTCGTCAACAGCATGGCCGACCTGTTCCACCAGGCGGTC 52267 ||||| ||| ||| ||||||||||||| ||| | |||||||||||| | ||| Sbjct 18078 TGGACTAAGCCCCGCAAGGTGTTCGTCAACTCGATGTCAGACCTGTTCCACGACAAGGTG 18137 Query 52268 CCCGATGACTACATCGCCCGGGTGTTCGCCGTCATGGCCCAAGCGCCACAGCACACGTTC 52327 | || ||||||||||| | ||| | || || ||||| |||| || ||||| ||| Sbjct 18138 TCTGACGACTACATCGCGCAGGTATGGGCGGTGATGGCATGGTCGCCGCACCACACCTTC 18197 Query 52328 CAGCTGCTGACCAAGCGTCACGCGCGGATGCGG 52360 ||| | || |||||||| |||| || |||||| Sbjct 18198 CAGATACTCACCAAGCGCCACGGCCGAATGCGG 18230 Score = 118 bits (130), Expect = 5e-22 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 52604 ATTGATTGGGTCGTGGTGGGTGGCGAATCCGGTACGGGCGCAAGGCCGATGCATCCCGAG 52663 || || ||||| | || || ||||||||||| | ||||||||||| ||||| ||||| Sbjct 18576 ATCGACTGGGTGATCGTCGGCGGCGAATCCGGGTCCGGCGCAAGGCCAATGCACCCCGAC 18635 Query 52664 TGGGCGCGGTCGCTTCGTGACCAGTGCGCCGCGGCCAAGGTGCCGTTCCTGTTCAAGCAG 52723 |||||||| ||||| || || ||||||| || || |||||||||||||||||||| Sbjct 18636 TGGGCGCGCTCGCTACGCGATCAGTGCGTAGCCGCTGGCGTGCCGTTCCTGTTCAAGCAA 18695 Query 52724 TGGGGCAACTGGA 52736 |||||| | |||| Sbjct 18696 TGGGGCGAGTGGA 18708 >seq138175 Length=113840 Score = 192 bits (212), Expect = 3e-44 Identities = 244/334 (73%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 52041 CCGACGCCACGTGGAACCCCGTAACGGGGTGCAGCGAGGTGTCACCAGGTTGTGATCGGT 52100 ||| | |||||||||| || || || || ||||||||||| | |||||||||| | Sbjct 16053 CCGGCACCACGTGGAATCCAGTTACCGGCTGCAGCGAGGTCAGTTCTGGTTGTGATCACT 15994 Query 52101 GCTACGCCAAGGCATTTGCTGAGCGGTTCCGCGGCACCGAGGGTCACTACTACCAGCGCG 52160 ||||||||||| | || || ||||||| |||||| ||| ||||||||||||| | Sbjct 15993 GCTACGCCAAGACTTTCGCCGAGCGGTGGCGCGGCGTGCCGGGCCACTACTACCAGCAAG 15934 Query 52161 GGTTCGACGTGGTGTTGCGACCGGAGAAGCTGGACCAGCCCATCCGGTGGACCCGGCCGC 52220 ||||||| ||| | |||| || ||||||||| ||||| || || | ||||| | Sbjct 15933 GGTTCGATGTGCAGCTGCGCCCCGAGAAGCTGCTGCAGCCACGCCAGTTGGTGCGGCCAC 15874 Query 52221 GCCTGGTGTTCGTCAACAGCATGGCCGACCTGTTCCACCAGGCGGTCCCCGATGACTACA 52280 | | | | ||||||||| ||| |||| |||||| | | | ||||||| ||||| Sbjct 15873 GGCGGATCTTCGTCAACTCAATGTCCGATCTGTTCTATGACACCATCCCCGACAGCTACA 15814 Query 52281 TCGCCCGGGTGTTCGCCGTCATGGCCCAAGCGCC--ACAGCACACGTTCCAGCTGCTGAC 52338 |||| |||||||||| |||||| | | || || |||||| | ||| | ||||| Sbjct 15813 TCGCGTCGGTGTTCGCCACCATGGCG--ATCACCGAACGGCACACCTATCAGGTCCTGAC 15756 Query 52339 CAAGCGTCACGCGCGGATGCGGCACCTGCTCAAC 52372 |||||| |||| ||||||||| ||||||||| Sbjct 15755 CAAGCGGCACGGCCGGATGCGGGCGCTGCTCAAC 15722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247854221075424