Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031269.1 Length=51884 Score E Sequences producing significant alignments: (Bits) Value seq216857 187 8e-43 seq276562 172 2e-38 seq311842 104 8e-18 >seq216857 Length=94037 Score = 187 bits (206), Expect = 8e-43 Identities = 805/1244 (65%), Gaps = 88/1244 (7%) Strand=Plus/Plus Query 1871 CGAATTTGACGCTCTGACAGCAGCTTTCTGAGGA----GGTGACCATGGCGGATGAGGTG 1926 |||||| |||||| ||||||| | ||||||| | || ||| ||||| | | | Sbjct 31849 CGAATTCGACGCTATGACAGCCACATTCTGAGAAAGGGGGCGACGATGGCACAGAAAAGG 31908 Query 1927 AAGCCACCGAAGCCCGCGTTCTCCGAGAAGGGCTACGTCGCCGACTCGTCCGGCAAC--- 1983 | || ||| |||||| | |||||||||| ||||||| | |||| ||||| Sbjct 31909 A--CCGCCGC--CCCGCG--CACCGAGAAGGGGTACGTCGTCAGCTCGGCCGGCTCTATG 31962 Query 1984 --CCCGGATGGCCCCAGTGGGTACAGGACGAGCGGGTCCCCGATCTGCGATGGCCCGAGA 2041 | || ||| ||| | || ||||||| | | || ||| ||||| | | Sbjct 31963 GGCTGGGGTGGACCCCTCGAC--CAATTCGAGCGGACCACAGACCTGATCTGGCC-GCTA 32019 Query 2042 GCG-TGGAGACGTTCGGCCGGATGCTGCGCGAGGACTCCCGAGTGTCGTCCCTACACGCG 2100 || || ||||| | || ||| | ||||||||| ||||| | | || ||| | Sbjct 32020 TCGGTGTGGACGTACACGCGCATGGTCCGCGAGGACGCCCGAATTGCATCGGTACTCAGA 32079 Query 2101 GCGATCACCATGCCGATCCGTCGAACACCGTGGCGGGTCGCCGCG-AGCGGTGCGCGCGA 2159 || | |||||||||| || || ||||||| || | ||| | |||||| | || Sbjct 32080 GCTGTTGGGCTGCCGATCCGCCGCACCACGTGGCGTATC-CGGCGCAACGGTGCCAGTGA 32138 Query 2160 CGAGGTCGTGGAGTTCGTGGCGAAGAACTTCAACCTGCCGATCGAGGGCGGCGA------ 2213 |||||| || || ||||| ||| ||| || || || |||||||||| ||| Sbjct 32139 CGAGGTTGTCGAATTCGTCGCGCGAAACCTCGGACTTCCCATCGAGGGCGCCGAGGGCAC 32198 Query 2214 ------CAACCTGCCCCAGCCCACACGCACGAAGGGCAAGTTCTCGTGGGTACAGCACCT 2267 ||| || | |||| || || ||| ||||| |||| ||||||| Sbjct 32199 CGAAGACAAGAACCCGAAATCCACGCGTACTCGCGGCCGATTCTCATGGGACAAGCACCT 32258 Query 2268 CCCACAGGCGCTCACCGCTCTGCCGTACGGGCACAGCGTGTTCGAGCAGGTGTA-CTGGC 2326 | ||||| |||| | |||| ||||||||| ||||||||||||||||| | | Sbjct 32259 ACAGCAGGCACTCATGTCCCTGCGATACGGGCACGCGGTGTTCGAGCAGGTGTATCAGAT 32318 Query 2327 CGCCCGATGAGG--CCGG----CCGAACCTTCTTGCGCAAGCTCGCGCCGCGGCCGCAGC 2380 || | |||| |||| |||| | | |||||||||| || || || || || Sbjct 32319 CGAGGGC-GAGGGCCCGGAAGCCCGAGCGGTGCTGCGCAAGCTTGCTCCACGTCCCCAAG 32377 Query 2381 GCACGATCTCGAACTGGAACGTCGCGCTCGACGGCGGCCTGATGTCGATCGAGCAGTA-C 2439 |||||||||||| ||||| || || | ||||||||| || | |||||||||||| | | Sbjct 32378 CCACGATCTCGAAATGGAATGTGGCCCGCGACGGCGGGCTCGTATCGATCGAGCAGCAGC 32437 Query 2440 GCGCCAGCGTCG--AACGGTGT------TGTGAAG----TACGGGAT--CAACCCGCTGA 2485 |||||||| | | || || || || | | | || | ||| || Sbjct 32438 CCGCCAGCGCCTTCACCGTTGCATCCAATGGGATGACCATTCCTTATGGCGGCCCATTGG 32497 Query 2486 A------GATTCCGATCGGCCGGCTGGTCGTGTACTCGCGCGACCAGGACCCGGGCGTCT 2539 | | | || ||| || |||||||| || | || ||| | || || ||||| | Sbjct 32498 ATTCGGTGCTGCCCGTCGAGCGTCTGGTCGTCTATTTGCACGAGCCCGATCCAGGCGTGT 32557 Query 2540 GGTGGGGCAACTCACTGCTGCGGCCGTCGTACAAGCATTGGCTCCTCAAGGATGAGCTGA 2599 || |||||| ||||| || || |||||||||| ||| ||||| || ||||||| Sbjct 32558 GGATCGGCAACAGCCTGCTACGTCCCGCGTACAAGCACTGGAAGCTCAAAGACGAGCTGA 32617 Query 2600 TCCGCTACCAGGCGGTGGCGATCAAGC-GCACCGGGATGGGCGTGCCGGTCGCGACCGCC 2658 | ||| | |||| | || | || || || ||| || || ||||| | | | | Sbjct 32618 TGCGCATCGAGGCCGCCGC-AGCACGCCGCCACGGCATCGGTGTGCC--TTGGATCAGGG 32674 Query 2659 GCGGAGGGAGCGGAG---CAGGGCGA----CGTC---GACAAGCTCGCCGAGATGGCG-- 2706 || | | | | || || | ||| ||| || || || || || || Sbjct 32675 GCA-ACGAAACTGATTCCCAAGACGAAGAACGTATGGGAGAA-CTGCTGGACATCGCATC 32732 Query 2707 CAGCAGTACCGAGGTGGCGACACCTCGGGAGTCGGACTGCCGTACGGCGCAGAT--CTGA 2764 |||| ||| | |||||||| | |||| | | || | | |||| ||| | | Sbjct 32733 CAGC--TACAGCGGTGGCGAGTCGGCGGGCCTGGCCCTCACCGAAGGCGAAGACGCCGGC 32790 Query 2765 AGCTGGTCACGCCGAACGGCAACCTGATCGATA-TCGGCGCGGCGATCGCCTACCACGAC 2823 | | ||| |||| | |||| | ||| || |||||||| |||||| ||||||||| Sbjct 32791 ATCATGTC--GCCGCAGGGCACGCCGATGGACCCTCGGCGCG-CGATCGAGTACCACGAC 32847 Query 2824 AACATGATCGCGATCGCCGGTCTCGCGCACTTCCTCAACCTCGAGGGCGGCGGCGGATCG 2883 || ||| ||| | | | | ||||||||||| || || || ||| ||||| || Sbjct 32848 CACCAGATGGCGCTGGTTGCGTTGGCGCACTTCCTGAATCTGGACGGCAAGGGCGGTTCC 32907 Query 2884 TATGCGCTCGCGAGCGTGCAGGAACACACCTTCACCCAATCGGTGCAGACGACCGCCGAG 2943 |||||||| |||||||| |||| |||| ||| || || ||||| ||| |||||| Sbjct 32908 TATGCGCTGGCGAGCGTCCAGGCCGACACGTTCGTGCAGTCCGTGCAAACGGTCGCCGAT 32967 Query 2944 TGGGTCCGCGACACCGCGACCGCCCACATCGTCGAGGACCTCGTCGACATCAACTTCGGC 3003 ||||||| || ||| ||||||||||| || |||||||| |||||||| ||||| Sbjct 32968 GACATCCGCGATACAGCGCAGGCCCACATCGTTGAAGACCTCGTTGACATCAATTTCGGT 33027 Query 3004 GTCGACGAGCCCTCACCGCGGCTGGTGTTCGACGAGATCGGTTC 3047 | || || ||| | || |||||| | ||| || || || || Sbjct 33028 GAGGATGAACCCGCGCCCTTGCTGGTATGCGATGAAATTGGCTC 33071 Score = 116 bits (128), Expect = 1e-21 Identities = 101/124 (81%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 3961 CAAGGAA-GGAGGCCCCCGTGGCCACTTTGAAGGAAGGCCTCGCGGAGCGCCTCGGCATC 4019 ||||||| |||| | ||| |||| |||| || ||||||||| || |||||||| Sbjct 34149 CAAGGAAAGGAGCACATTGTGCCCACCCTGAAAGAGGGCCTCGCGCAGAAGCTCGGCATT 34208 Query 4020 GACGCCGATGCGGACGACGAGACCACACTGCAGGCGCTCGACGAAGCACTCGACGAGCGC 4079 |||||| |||||||||||||||||| |||||||||||||||| || |||| ||||||| Sbjct 34209 TCCGCCGACGCGGACGACGAGACCACATTGCAGGCGCTCGACGAGGCTCTCGCCGAGCGC 34268 Query 4080 GCCG 4083 |||| Sbjct 34269 GCCG 34272 Score = 80.6 bits (88), Expect = 9e-11 Identities = 61/68 (90%), Gaps = 3/68 (4%) Strand=Plus/Plus Query 28849 GTTCGCATCGAGTAGGTCTGGGGTTCGATTCCCCATAGCTCCACCAAAAAGAGCAGGTCA 28908 |||||||||||| ||||| ||||||||||||||| |||||||| ||||||| |||||||| Sbjct 7443 GTTCGCATCGAGAAGGTCAGGGGTTCGATTCCCCTTAGCTCCA-CAAAAAG-GCAGGTCA 7500 Query 28909 GACGGCCT 28916 ||| ||| Sbjct 7501 -ACGACCT 7507 >seq276562 Length=247471 Score = 172 bits (190), Expect = 2e-38 Identities = 298/428 (70%), Gaps = 30/428 (7%) Strand=Plus/Minus Query 18803 AGGCACCCGATGAGCTTTCGTACGGCCTACGGCTACAAGTACTCGGAGAACGGTTGGCGA 18862 |||||| | ||||| ||||| || ||||||||| ||| || || || ||| ||||||| Sbjct 237575 AGGCACACCATGAGTTTTCGCACCGCCTACGGCAACACCTATTCCGAAAACAGTTGGCGC 237516 Query 18863 ATGTGCAACCGCGACGAGTGCGTCACGGTCAC---CGTCGCCGGGATGGGCCTGCACGT- 18918 ||||||||||||||||| |||| || |||| | || |||| || |||| | Sbjct 237515 ATGTGCAACCGCGACGAATGCGACA---TCACGCGCATCCCCGGTCTGTACCTGGTTGAT 237459 Query 18919 -CCGCTCCG----GCTACG-----CCGCCGAGG-TGCTCGGCGCGTGGGTTCGCTGGTAC 18967 |||| ||| || | | |||| || | ||||| || ||| | |||||| Sbjct 237458 ACCGCACCGCTGCGCAAGGGGGCACCGCTGACCATTCTCGGGGCATGGTTGTACTGGTAT 237399 Query 18968 CACGAGAACGTCGAGCGCATCGACCAGTACAAGCCGCTCGACGACTGGGGGTGGTCGAAC 19027 || |||||||| ||| | | | ||| | ||||| |||||| || Sbjct 237398 GACCGCAACGTCGAAGAGATCATC---TCC---CCGGTG------TGGGGCTGGTCGGAC 237351 Query 19028 ACCAACGACGTCGCGACGTCGAATCACCTGTCGGGCACCGCCGTCGACCTCAACGCCACC 19087 |||||||||||||| | |||||||||||| ||||||||||||| ||| ||||||| || Sbjct 237350 ACCAACGACGTCGCCAACTCGAATCACCTGGCGGGCACCGCCGTGGACATCAACGCACCC 237291 Query 19088 CAGTACCCGTGGGGCCGCCGCGTAATGCCGGCCGACCGCATCGCGAAGGTGCGCCGGGGT 19147 |||||||||||||| || ||||| | |||||||| || || ||| || Sbjct 237290 CAGTACCCGTGGGGTGCACGAACCATGCCCAGCACTCGCATCGCCAAAGTCCGCGAAGGA 237231 Query 19148 CTCGCCCTGTTCGAGGGCACCATCTTCTGGGGCGCCGACTGGTCACGGGCCGACGAGATG 19207 || || || |||||| | ||| |||||| || |||||| || |||||||| ||| Sbjct 237230 CTTAAGCTCTTTGAGGGCGCGGTCTACTGGGGTGCGGACTGGAACCGCGCCGACGAAATG 237171 Query 19208 CACTACCA 19215 |||||||| Sbjct 237170 CACTACCA 237163 >seq311842 Length=41669 Score = 104 bits (114), Expect = 8e-18 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 44279 AGATTCGCACGAAGCTGCGCGGGCGGGACCTCGTGTGCTGGTGCCCGCTCGACCAGCCGT 44338 |||||||| | |||||||||| | ||||||| |||||||||||||||||||||||||| Sbjct 9626 AGATTCGCGCCGAGCTGCGCGGCCACGACCTCGCGTGCTGGTGCCCGCTCGACCAGCCGT 9685 Query 44339 GTCATGCCGACGTGCTCCTGGAGCTCGCGAAC 44370 | ||||||||||| || || || |||| ||| Sbjct 9686 GCCATGCCGACGTACTGCTCGAAATCGCCAAC 9717 Score = 91.5 bits (100), Expect = 5e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 43945 CGAATCCAGCGCCGCCGCACGAAGGGCTGGCGGATGCCCGAAGGCGCGGTCTACGTTGGT 44004 ||||||||| |||||||||||||| ||||| | |||||| |||||| ||||||| || Sbjct 9412 CGAATCCAGTTGCGCCGCACGAAGGGATGGCGCAAGCCCGAGGGCGCGATCTACGTCGGG 9471 Query 44005 CGGCCGACGAGATGGGGTAACCCGT 44029 ||||||| |||||||||| |||| Sbjct 9472 CGGCCGAGTCGATGGGGTAATCCGT 9496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165203683790976