Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dryococelus_20australis_20[genbank_20GCA_5F002236955.1_202017-07-28] 357,088 sequences; 3,416,447,916 total letters Query= NC_031936.1 Length=49979 Score E Sequences producing significant alignments: (Bits) Value seq311842 201 4e-47 seq234526 132 2e-26 >seq311842 Length=41669 Score = 201 bits (222), Expect = 4e-47 Identities = 299/417 (72%), Gaps = 8/417 (2%) Strand=Plus/Plus Query 17765 CCGATCCTCGAAGACGCCGAGATG--ATGATCAAGCCGCGGCGTTTCAAGACCGGCGACC 17822 |||||| | |||||||| ||| || ||| | | |||||| | ||| |||||| | Sbjct 28387 CCGATCATGGAAGACGCAGAGCTGCAATGGG--ATCTGCGGCGCTGGAAGCGCGGCGATC 28444 Query 17823 CTGAACCGTTCCCGGGGGCGGGTACGAACTGGCGTAACGGCACCCTGTTCGTCGACATCG 17882 | || |||| ||||| ||||| || |||||||| | |||||| ||||| ||| ||||| Sbjct 28445 CAGAGCCGTGGCCGGGCGCGGGCACTAACTGGCGCACCGGCACGCTGTTTGTCCGCATCG 28504 Query 17883 TCGACAAATCCGGTTTCCGGACCGGTACGTCGTTGGGCGGCAACCTCGCCACCGGTTTCG 17942 | ||||| || || ||||| |||||||| ||| | ||||||||||| ||||| || || Sbjct 28505 TTGACAAGTCAGGGTTCCGCACCGGTACATCGATCGGCGGCAACCTGGCCACAGGATTTA 28564 Query 17943 CGCGGACCATCGCCAACGTCACCTCCAATTATGTGGAAGACACCTACGACCTTCTCACCG 18002 ||||||| ||||||| || || || |||| ||||||| ||||||||| |||||| Sbjct 28565 CGCGGACGATCGCCAGTGTGCTGTCTAACCATGTTGAAGACAGCTACGACCTGTTCACCG 28624 Query 18003 GCGACCCGGTGGACGTCGAAGGGTACCGGCTGCCGGGGATTCTCGGCACCCAACCCGAAC 18062 | ||| || | |||| || ||||| ||||| || || ||||||||| | | | | Sbjct 28625 GGGACACGATCGACGAGACCGGCTACCGACTGCCCGGCATCCTCGGCACCGAGGCTGCGC 28684 Query 18063 GGCCGCATGTGGTGTACCTGCATGGGCG-GGTGAAGGGCGTGGAGAACTTCAAAC-TCAC 18120 || | ||| ||||| || |||| | | ||| | | ||| || ||| || | Sbjct 28685 ACCCCTACGTGACGTACC-GCGACGGCGACATTACCGGCATCCA-AACATCGAACTTCTC 28742 Query 18121 CCAAGCACCCGGTGGGCCTGGTCGTATCACGGCTGGCGGTCAGTCGATGCCCGGAGT 18177 | ||||||||||| | || | ||||||| || || ||||||||||| || || Sbjct 28743 ACGCTCACCCGGTGGGGCAGGAAGGATCACGGTCGGTGGCCAGTCGATGCCGGGGGT 28799 >seq234526 Length=1326 Score = 132 bits (146), Expect = 2e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 30727 AGCTCATCCGCCACAACCTGGACGACTTCAACGAGTTCGGCTTGGTCGGATTTGAAATCC 30786 ||||||||||| ||||| ||| ||||||| | ||||||||||||||| ||||||||| | Sbjct 505 AGCTCATCCGCAACAACATGGCCGACTTCGAGCAGTTCGGCTTGGTCGCATTTGAAATGC 446 Query 30787 GACCAAGACCAGCCGGCCAACACGGCGGTGGAGACGTCGAGTTCGCCATCCTCAATGAGC 30846 | |||| || || || |||||||| || |||||| || |||| | |||| ||||| Sbjct 445 GGGCAAGGCCTCAGGGGCAGCACGGCGGCGGCGACGTCCAGATCGCGCTTCTCACTGAGC 386 Query 30847 CGCACGCGACGCTGCTGATCACCTACCTCCGCAACA 30882 |||| |||||| |||| | |||| | | ||||||| Sbjct 385 CGCAGGCGACGTTGCTCCTGACCTTCATGCGCAACA 350 Score = 104 bits (114), Expect = 7e-18 Identities = 176/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 32714 GCAGCCCGCTCTCCAGGGGCCAGAGCTTGTAGCCGCTGCGCTCGTGGAGGCGAATCAGAT 32773 |||| |||| || |||||||| ||||| | || || ||| || | || || | || | Sbjct 279 GCAGTCCGCGCTGCAGGGGCCGGAGCTGCTGGCAGCCGCGGTCCTCGAATCGCAGAAGGT 220 Query 32774 GTTGGAGCAACGCGATGCCCGCATCTATCAGCTTGAGCAGAAAGTCACCGGCGACGCCCA 32833 | ||||| ||||| ||||||||| ||||| ||||| || || ||| |||||||| Sbjct 219 CATCGAGCAGCGCGACGCCCGCATCCTGCAGCTGGAGCACAAGATCGCCGCCGACGCCCC 160 Query 32834 CAAGGTGTCGTACGTCGACACCTATGTCGCTGACGCTGATTGCCTCACCTTCTCCACCGT 32893 ||||| |||| ||||| | ||||| |||| || || | || |||||| Sbjct 159 GAAGGTCGGGTACATCGACCAGTTCGTCGCCGACGAGGACCTACTGAAACTCCGCACCGT 100 Query 32894 CGCCTCCACCCTGAATCTGCAGGAGTCAAAGCTGCGTGAGCTTCTCATCGAGAAGAACTG 32953 ||| || | ||| |||||||| ||| |||||||| | |||| ||| || Sbjct 99 CGCGTCGAACCTCGGCGTGCAGGAGAAGTGGCTCCGTGAGCTGTTGATCGGCAAGCGGTG 40 Query 32954 GATCTACGTGCAGAC 32968 |||||||||| |||| Sbjct 39 GATCTACGTGGAGAC 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159133533391296