Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq299 134 2e-26 seq28 118 2e-21 seq13 102 1e-16 seq143 100 4e-16 seq413 93.3 6e-14 >seq299 Length=124767 Score = 134 bits (148), Expect = 2e-26 Identities = 106/127 (83%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 |||||||| || | ||| |||||||| |||||||||||||| |||||||||||||| Sbjct 103395 TCCACCTCGTAGACGTAAGACCAAATGCAAAGTAGATTCTTTCTGAATATTATAATCTGA 103336 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| |||| | ||| |||| ||||||||||||||||| |||||||||||||| || || Sbjct 103335 AAGGGTTCGACCATCTTCTAGCTGTTTTCCAGCAAAAATTAATCTTTGCTGATCTGGTGG 103276 Query 146170 AATTCCT 146176 ||| ||| Sbjct 103275 AATGCCT 103269 >seq28 Length=1782156 Score = 118 bits (130), Expect = 2e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 |||||||||||||| | || ||||| | ||| |||||||| || |||||||| || Sbjct 1076442 TCCACCTCTAAGTCGAAGAACTAAATGAAGAGTTGATTCTTTCTGAATGTTATAATCAGA 1076501 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || | | ||| || | ||| ||||||||||| |||||||| |||||||| || || Sbjct 1076502 AAGTGTGCGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGCGG 1076561 Query 146170 AATTCCTTCTTTATCTTG 146187 |||||||||||| || || Sbjct 1076562 AATTCCTTCTTTGTCCTG 1076579 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | ||| | || | ||||||||| || ||||||||||||||| Sbjct 1077583 CCACCTCTCAGTCGAAGTACAAGGTGGAGAGTAGATTCCTTCTGAATATTATAATCTGAA 1077642 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | |||||| ||||| || |||||||||||||| || || || Sbjct 1077643 AGTGTGCGTCCATCCTCAAGTTGTTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGG 1077702 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| |||||||| Sbjct 1077703 ATTCCTTCCTTATCTTG 1077719 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | ||| | ||| | || ||||| || ||||||||||||||| Sbjct 1077811 CCACCTCTCAGTCGGAGTACAAGATGAAGTGTTGATTCCTTCTGAATATTATAATCTGAA 1077870 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | |||||| ||||| || |||||||| |||||||| || || Sbjct 1077871 AGTGTGCGCCCATCCTCAAGTTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGG 1077930 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| |||||||| Sbjct 1077931 ATTCCTTCCTTATCTTG 1077947 Score = 105 bits (116), Expect = 1e-17 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| |||| | ||| | || | |||||||| ||| || || || ||||| || Sbjct 1076899 CCACCTCTCAGTCGAAGTACAAGGTGAAGTGTAGATTCCTTTTGA-ATGTTGTAATCAGA 1076957 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| | | | || || | |||||| ||||| ||||||||||| |||||||| || || Sbjct 1076958 AAGTATACGCCCGTCCTCGAGTTGTTTACCAGCGAAAATCAATCTCTGCTGATCTGGTGG 1077017 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 |||||||| |||||||| |||||||||| ||| || Sbjct 1077018 GATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTATCTGAAGCTTCAAC 1077077 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||| | ||||| ||||| ||||| | || |||| ||| |||||||| Sbjct 1077078 TTCCAAAGTGATAGTTTTTCCTGTAAGAGTCTTAACGAAAATTTGCAT 1077125 Score = 102 bits (112), Expect = 1e-16 Identities = 154/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| || | || | ||| | || | ||||||||| || || || ||||| ||| Sbjct 1077355 CCACCCCTCAATCGGAGTACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAA 1077414 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | || || | |||||| ||||| ||||||||||| |||||||| || || Sbjct 1077415 AGTGTACGTCCGTCCTCGAGTTGTTTACCAGCGAAAATCAATCTCTGCTGATCGGGTGGG 1077474 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 |||||||| |||||||| |||||||||| ||| ||| Sbjct 1077475 ATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTATCTGAAGCTTCAACT 1077534 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||||| ||||| ||||| | || |||| ||| |||||||| Sbjct 1077535 TCCAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACGAAGATTTGCAT 1077581 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| || | || | ||| | || | ||||||||| || || || ||||| ||| Sbjct 1077127 CCACCCCTCAATCGGAGTACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAA 1077186 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | || || | |||||| ||||| ||||||||||| |||||||| || || Sbjct 1077187 AGTGTACGTCCGTCCTCGAGTTGTTTACCAGCGAAAATCAATCTCTGCTGATCGGGTGGG 1077246 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 |||||||| |||||||| |||||||||| ||| ||| Sbjct 1077247 ATTCCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTATCTGAAGCTTCAACT 1077306 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||||| ||||| ||||| | || || | ||| |||||||| Sbjct 1077307 TCCAAAGTGATGGTTTTTCCTGTAAGAGTCTTGACGAAAATTTGCAT 1077353 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | ||| | || | || ||||| || || || ||||||||| Sbjct 1076671 CCACCTCTCAGTCGAAGTACAAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCTGAA 1076730 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | |||||| ||||| || |||||||| |||||||| || || Sbjct 1076731 AGTGTGCGCCCATCCTCAAGTTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGG 1076790 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| |||||||| Sbjct 1076791 ATTCCTTCCTTATCTTG 1076807 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| |||| | ||| | || | || ||||| || || || ||||||||| Sbjct 1078039 CCACCTCTCAGTCGGAGTACAAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCTGAA 1078098 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | |||||| ||||| || || ||||||||||| || || || Sbjct 1078099 AGTGTGCGCCCATCTTCAAGTTGTTTACCAGCGAAGATTAATCTTTGCTGGTCTGGTGGG 1078158 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| |||||||| Sbjct 1078159 ATTCCTTCCTTATCTTG 1078175 >seq13 Length=4112475 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || | ||| | |||||| ||||| || ||||| || || || || || |||| Sbjct 3688409 TTCCCCCCCGAAGACGTAATACTAAATGCAATGTAGACTCCTTTTGGATGTTGTAGTCTG 3688350 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | || || | |||||| |||||||| ||||| | ||||| || |||| Sbjct 3688349 AGAGCGTTCTCCCGTCTTCCAGTTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3688290 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||||||||| || Sbjct 3688289 GAATTCCTTCTTTATCCTG 3688271 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || ||||| || || || |||| Sbjct 3687269 TTCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTCTGGATGTTGTAGTCTG 3687210 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | ||| || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3687209 AGAGCGTTCTCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3687150 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||||||||||||| Sbjct 3687149 GAATTCCTTCTTTATCTTG 3687131 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || ||||| || || || |||| Sbjct 3687953 TTCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTCTGGATGTTGTAGTCTG 3687894 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | ||| || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3687893 AGAGCGTTCTCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3687834 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||||||||||||| Sbjct 3687833 GAATTCCTTCTTTATCTTG 3687815 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || ||||| || || || |||| Sbjct 3685936 TTCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTCTGGATGTTGTAGTCTG 3685877 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | ||| || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3685876 AGAGCGTTCTCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3685817 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||||||||||||||| || || |||||| |||| Sbjct 3685816 GAATTCCTTCTTTATCCTGAATCTTCGCTTTCACGTTTTCTATTGTGTCTGAAGCCTCTA 3685757 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || ||||| ||||| ||||| | ||||| | || ||||||||| Sbjct 3685756 CCTCCAGGGTGATGGTTTTCCCTGTGAGCGTTTTTACAAAGATTTGCATT 3685707 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || ||||| || || || |||| Sbjct 3687497 TTCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTTTGGATGTTGTAGTCTG 3687438 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | || || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3687437 AGAGCGTTCTCCCGTCTTCGAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3687378 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||||||||||||||| || |||||| ||||| Sbjct 3687377 GAATTCCTTCTTTATCTTGTATCTTCGCCTTCACGTTCTCTATTGTGTCTGAAGCTTCTA 3687318 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || ||||| ||||| ||||| | ||||| | || || |||||| Sbjct 3687317 CCTCCAGGGTGATGGTTTTCCCTGTGAGCGTTTTTACAAAGATCTGCATT 3687268 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || ||||| || || || |||| Sbjct 3688181 TTCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTCTGGATGTTGTAGTCTG 3688122 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | ||| || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3688121 AGAGCGTTCTCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3688062 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||||||||||||||| || Sbjct 3688061 GAATTCCTTCTTTATCCTG 3688043 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || || || || || || |||| Sbjct 3685708 TTCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCTG 3685649 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | || || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3685648 AGAGGGTTCTCCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3685589 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||||||||||||||| Sbjct 3685588 GAATTCCTTCTTTATCTTG 3685570 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || || || || || || |||| Sbjct 3687041 TTCCTCCTCGAAGTCGAAGCACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCTG 3686982 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | || || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3686981 AGAGGGTTCTCCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3686922 Query 146169 GAATTCCTTCTTTATC 146184 |||||||||||||||| Sbjct 3686921 GAATTCCTTCTTTATC 3686906 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| ||||| | ||||| || | || || || || || || || |||| Sbjct 3687725 TTCCTCCTCGAAGTCGAAGCACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCTG 3687666 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || ||||| | || || | ||| || |||||||| ||||| | ||||| || |||| Sbjct 3687665 AGAGGGTTCTCCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 3687606 Query 146169 GAATTCCTTCTTTATCTTG 146187 | ||||||||||||||||| Sbjct 3687605 GCATTCCTTCTTTATCTTG 3687587 >seq143 Length=5469012 Score = 100 bits (110), Expect = 4e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 24030 ATAATCACATTTATCAAACCATCTTGCGTGTTGTATCCAAGGATCATCGTCTGTTTCCCA 24089 ||||| || ||| |||||| |||||||||| |||||||||||| || | |||||| Sbjct 4939670 ATAATAGCACTTAGAGAACCATTTTGCGTGTTGCTCCCAAGGATCATCTTCAGGTTCCCA 4939729 Query 24090 TTTATTTAAACCACCATCACAATAAAAGCATTTAACTTTATCACTTTTTCCAGTATAAAA 24149 | || |||||||| |||||| | | || | || ||||| ||||||||||||| | Sbjct 4939730 ATCTTTCAAACCACCTCCACAATGATAACAAAGAGTTTGATCACCTTTTCCAGTATAATA 4939789 Query 24150 GAATCCAGCTTCTGCTAGTTTTTCT 24174 || ||||| ||||||| | |||| Sbjct 4939790 AAAGCCAGCATCTGCTAACTGTTCT 4939814 Score = 96.9 bits (106), Expect = 5e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 23998 TGAATAAAATCTTTGCCTTTTACAAGTTTAACATAATCACATTTATCAAACCATCTTGCG 24057 ||||| || | || |||| ||| || || ||| | ||||||||| |||||||||||| Sbjct 4946186 TGAATGAATTTTTGGCCTCTTATGAGATTTACAAATTCACATTTAGAAAACCATCTTGCA 4946245 Query 24058 TGTTGTATCCAAGGATCATCGTCTGTTTCCCATTTATTTAAACCACCATCACAATAAAAG 24117 |||| |||| |||||| ||||||||| | |||| |||||||||||| |||| Sbjct 4946246 TGTTCAGTCCACACATCATCTGTTGTTTCCCAATCTCGTAAAGCACCATCACAATGAAAG 4946305 Query 24118 CATTTAACTTTATCACTT 24135 ||| ||||| ||| ||| Sbjct 4946306 CATCTAACTAGATCTCTT 4946323 >seq413 Length=693780 Score = 93.3 bits (102), Expect = 6e-14 Identities = 125/182 (69%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| ||||| || || || | | ||| ||||||||||| ||||| ||||| | || | Sbjct 292383 ATATTGTAATCGGAGAGGGTGCGTCCATCTTCTAATTGTTTCCCAGCGAAAATAAGTCGT 292324 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215 |||||||| |||||||||||||| || || || ||| Sbjct 292323 TGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTCAATAGTG 292264 Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275 |||||| |||||| || || || || |||||||| || | ||||| | |||||| ||| Sbjct 292263 TCTGAAGCTTCTACCTCAAGGGTAATGGTTTTACCCGTGAGGGTTTTTACGAATATCTGC 292204 Query 146276 AT 146277 || Sbjct 292203 AT 292202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743487569333760