Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 1e-13 >seq13 Length=4112475 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | |||||||| ||| | || |||||||| ||||||||||| || Sbjct 3687268 TCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTCTGGATGTTGTAGTCTGA 3687209 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| | | || |||| |||||||| || || || | ||||||||||| || Sbjct 3687208 GAGCGTTCTCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGG 3687149 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || || || |||||| ||| | || |||| | || | | || || Sbjct 3687148 AATTCCTTCTTTATCTTGAATCTTTGCCTTCACATTCTCTATTGTGTCTGAAGCCTCTAC 3687089 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||||| || ||||| ||||| |||||||| ||||| Sbjct 3687088 CTCCAAGGTGATGGTTTTCCCTGTGAGCGTTTTTACAAAGATTTGCAT 3687041 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | |||||||| ||| | || ||||| || ||||||||||| || Sbjct 3687496 TCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTTTGGATGTTGTAGTCTGA 3687437 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| | |||| || | |||||||| || || || | ||||||||||| || Sbjct 3687436 GAGCGTTCTCCCGTCTTCGAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGG 3687377 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || || || |||||| ||| | | |||| | || | | ||| || Sbjct 3687376 AATTCCTTCTTTATCTTGTATCTTCGCCTTCACGTTCTCTATTGTGTCTGAAGCTTCTAC 3687317 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||||| || ||||| ||||| |||||||||||||| Sbjct 3687316 CTCCAGGGTGATGGTTTTCCCTGTGAGCGTTTTTACAAAGATCTGCAT 3687269 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | |||||||| ||| | || |||||||| ||||||||||| || Sbjct 3687952 TCCTCCTCGAAGTCGCAGCACCAAGTGAAGCGTGGACTCTTTCTGGATGTTGTAGTCTGA 3687893 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| | | || |||| |||||||| || || || | ||||||||||| || Sbjct 3687892 GAGCGTTCTCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGG 3687833 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || || || |||||| ||| | || |||| | || | | || || Sbjct 3687832 AATTCCTTCTTTATCTTGAATCTTTGCCTTCACATTCTCTATTGTGTCTGAAGCCTCTAC 3687773 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||||| || ||||| ||||| |||||||| ||||| Sbjct 3687772 CTCCAAGGTGATGGTTTTCCCTGTGAGCGTTTTTACAAAGATTTGCAT 3687725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323055549375680