Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq136 93.3 4e-14 >seq136 Length=558006 Score = 93.3 bits (102), Expect = 4e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 16504 AATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTG 16563 |||||||||||| |||| ||| ||||||||||||||| | ||| ||||| || | || Sbjct 337829 AATATAAGTATCAATTAACAAAGAATACATTTCTGAATGCACATTTTCCATGGCAACTTG 337770 Query 16564 AAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTT-CAGAGTAAAACCTTTCTGCTA 16622 |||||||||||||| | || || | ||||| |||| | || | || | ||| | | Sbjct 337769 GAAACCATAAAAGCAACGTGCCTCTGTGATTTGCACTTCCTGACT-GAATCGTTCGACAA 337711 Query 16623 AGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662 || || || || ||||||||| |||||||| || || Sbjct 337710 GATTCTCATTGACAATTCCATCGGAGGCTGCAAAGAATGC 337671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462487845310800