Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq97 141 7e-29 >seq97 Length=1675059 Score = 141 bits (156), Expect = 7e-29 Identities = 183/250 (73%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 |||||| ||||||||||| |||||||| ||||||||||| ||||| ||||| ||| |||| Sbjct 1318259 ATTTCCATTATTAACTACAAAACGGGTGTTTTGGAAAGGAGTTGTCGAAGAATTACTATG 1318318 Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAG 20162 ||| || || |||||||||||| ||| || || || ||| ||||| || |||| Sbjct 1318319 GTTCATAAAGGGATCAACAAATGCTAAAGAACTGTCAGCTAAAAATGTTAATATCTGGAA 1318378 Query 20163 CGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGG 20221 ||| || | || ||||| || || || ||| ||| | | ||||||| | Sbjct 1318379 TGCAAATAGCTCGCGTGAATTTCTAGACTCTTGCGGCTTT-ACAGATAGAGAAGAGGGCG 1318437 Query 20222 ATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGA 20281 | || || ||||| ||||||||||| |||||||| ||||| || | ||| || ||| Sbjct 1318438 ACTTAGGACCTGTTTATGGATTTCAGTGGAGACACTTTGGTGCAAAGTATAACGATATGC 1318497 Query 20282 ACACAAATTA 20291 || || |||| Sbjct 1318498 ACTCAGATTA 1318507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399163673800210