Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq136 87.8 3e-12 >seq136 Length=558006 Score = 87.8 bits (96), Expect = 3e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-T 125188 || ||||| || | ||||| |||||||| | |||||||||||| ||||| || |||| | Sbjct 337653 TTCATATCTCATGTATTGGCATTCTTTGCAGCCTCCGATGGAATTGTCAATGAGAATCTT 337712 Query 125189 GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCA 125248 || || ||||||| ||| || || || |||||| |||||||| || ||||| Sbjct 337713 GTCGA-ACGATTCAGTCAGGAAGTGCAAATCACAGAGGCACGTTGCTTTTATGGTTTCCA 337771 Query 125249 AATCATGATTGAGAACGTGCACTCGGAAATGTACTCT 125285 | | || || || ||||| || |||||||| ||| Sbjct 337772 AGTTGCCATGGAAAATGTGCATTCAGAAATGTATTCT 337808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741020498183280