Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq28 86.0 5e-12 >seq28 Length=1782156 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 ||||| ||||| || || |||||||| | | ||| ||||||| || |||||||| Sbjct 1077157 GTAGATTCCTTCTGGATGTTGTAATCAGAAAGTGTACGTCCGTCCTCGAGTTGTTTACCA 1077216 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || |||| | |||||||||||| || | || || || || |||||| ||| Sbjct 1077217 GCGAAAATCAATCTCTGCTGATCGGGTGGGATTCCTTCCTTATCTTGAATTTTAGCTTTG 1077276 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | |||||| || || ||| | || |||||||| ||||| | ||| Sbjct 1077277 ACATTTTCAATAGTATCTGAAGCTTCAACTTCCAAAGTGATGGTTTTTCCTGTAAGAGTC 1077336 Query 19025 TTGACAAAAATTTGCAT 19041 ||||| ||||||||||| Sbjct 1077337 TTGACGAAAATTTGCAT 1077353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414551690212132