Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 9e-14 >seq13 Length=4112475 Score = 91.5 bits (100), Expect = 9e-14 Identities = 152/219 (69%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTT-- 33212 || || || ||||||||||| ||||| ||||| || ||||| || || | | ||| Sbjct 3688395 CGTAATACTAAATGCAATGTAGACTCCTTTTGGATGTTGTAGTCTGAGA----GCGTTCT 3688340 Query 33213 --GGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTC 33270 ||| |||| ||| || ||| ||| || ||||| |||||||| | || || ||||| Sbjct 3688339 CCCGTCTTCCAGTTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTC 3688280 Query 33271 TTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGT 33330 ||| || |||| | ||| || ||| || ||||| | | || ||||| || Sbjct 3688279 TTTATCCTGAATCTTCGCTTTCACGTTTTCTATTGTGTCTGAAGCCTCTACCTCCAGGGT 3688220 Query 33331 TATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || |||||||| || || ||||| Sbjct 3688219 GATGGTTTTCCCTGTGAGCGTTTTTACAAAGATCTGCAT 3688181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318761368043844