Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq28 82.4 6e-11 >seq28 Length=1782156 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 |||||||| |||||||||||||||||||||| | | ||| ||||||| || || Sbjct 1076923 TGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAAAGTATACGCCCGTCCTCGAGTTGT 1076982 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 ||||| || |||| || | ||||||||| || | | |||||| || |||||| Sbjct 1076983 TTACCAGCGAAAATCAATCTCTGCTGATCTGGTGGGATTCCTTCCTTATCTTGAATTTTA 1077042 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 |||| | | || ||||| | || || || | || || ||||| || || Sbjct 1077043 GCTTTGACATTTTCAATAGTATCTGAAGCTTCAACTTCCAAAGTGATAGTTTTTCCTGTA 1077102 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || ||||| ||||| Sbjct 1077103 AGAGTCTTAACGAAAATTTGCAT 1077125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421229750152178