Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq136 96.9 4e-15 >seq136 Length=558006 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 || ||||| || | |||| |||| ||||||||||||||||| |||||||| |||||| | Sbjct 338764 TTCTGATACTCTCCAACTTTTTTCTCGAAAAAATTTGTCTTACCTTCCAAAGATATATGT 338705 Query 21245 TCCATAAAATCAAATGGATTTTCAGA 21270 ||||| || ||||| ||||||||||| Sbjct 338704 TCCATGAAGTCAAACGGATTTTCAGA 338679 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 21274 AAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTG 21333 ||||| || | |||||||||||| | || || || || ||||||||||| ||||| Sbjct 338542 AAATACCTTCTGACAACCCAGTTCAACGAGTAGTCGGTCCGCAACAAATTCTATGTATTG 338483 Query 21334 ACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAA 21390 |||||| | || ||||||||| || |||| || ||||| | || | ||||||||| Sbjct 338482 ACACATAAGTTTACAATTCATGCCTATCATTTCGACAGGCAACGCGTCTGTCAAAAA 338426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531873021480720