Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq97 129 2e-24 >seq97 Length=1675059 Score = 129 bits (142), Expect = 2e-24 Identities = 170/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374 |||||| | | || ||||| || | |||||| ||| ||||||||||| | || ||| Sbjct 1318260 TTTCCATTATTAACTACAAAACGGGTGTTTTGGAAAGGAGTTGTCGAAGAATTACTATGG 1318319 Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434 || || ||| |||||||| || ||||| |||| |||||||| || || ||| || Sbjct 1318320 TTCATAAAGGGATCAACAAATGCTAAAGAACTGTCAGCTAAAAATGTTAATATCTGGAAT 1318379 Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGTTG-GTCTTGTC-GACAACGAAGAAGGTG 111492 | |||| | || ||||| |||||||| || ||| | ||| | || | ||||| || | Sbjct 1318380 GCAAATAGCTCGCGTGAATTTCTAGACTC--TTGCGGCTTTACAGATAGAGAAGAGGGCG 1318437 Query 111493 ATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544 | | ||||| ||||| |||||||| ||| | |||||||||||| | || || Sbjct 1318438 ACTTAGGACCTGTTTATGGATTTCAGTGGAGACACTTTGGTGCAAAGTATAA 1318489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303283830667196