Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq28 87.8 2e-12 >seq28 Length=1782156 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || ||||| || | || || ||||||||||| ||||| ||| | Sbjct 1076669 ATGCAAATCTTCGTCAAGACTCTTACAGGAAAAACCATTACTTTGGAAGTTGAAGCATCG 1076610 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | |||||| ||||||| ||||||||||| |||| ||||| Sbjct 1076609 GACACTATTGAGAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCGCCAGATCAG 1076550 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111364 || || | || | ||| || || ||| | |||||| | | ||| | | ||||||| Sbjct 1076549 CAGAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGGCGCACACTTT--CTGATTATA 1076492 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 | || || |||||||| || || |||||||| | || || | ||||| Sbjct 1076491 ACATTCAGAAAGAATCAACTCTTCATTTAGTTCTTCGACTTAGAGGTGG 1076443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423018459067600