Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq97 113 4e-20 >seq97 Length=1675059 Score = 113 bits (124), Expect = 4e-20 Identities = 162/223 (73%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 |||| || || ||||| ||||| || || |||||| || ||||||||||| ||||| Sbjct 1318845 GTAATGTGTGCCAGCATGTAAGTCAACAGAGAATAGGATGCTATGTTAAAAGGTACTCCA 1318786 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTA-CATA 20361 | ||||||||| | || ||||| ||||||||||| ||||| |||| |||| |||| Sbjct 1318785 AGACCCATGTCAGCGCTTCTTTGATAAAGCTGACAGGACAGCTCGCCGTT-GCTAACATA 1318727 Query 20362 AAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCC 20420 |||||| || |||| || || || || | |||||| | | ||| || |||| Sbjct 1318726 AAATTGAACGAGACAA-TGGCATGGGGGTAATGCCATCTGTGGAATGTCAATTGGATTCC 1318668 Query 20421 ACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT 20463 | || |||||||||||||||| | | || | ||| ||||| Sbjct 1318667 AAGCTGACATAATGATTCTTCTGTTATTCGTAGAATTCTTTAT 1318625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441349749305520