Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq120 82.4 6e-11 >seq120 Length=4136026 Score = 82.4 bits (90), Expect = 6e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | |||||||||||||||||||| |||||||||||||| | ||||||||| | Sbjct 1132927 TGGCGGTAGGCGAGGGATGGCACAACTATCACCACGTGTTCCCGTGGGACTACAAGACGT 1132986 Query 108941 CCGAGTTGGG 108950 |||||||||| Sbjct 1132987 CCGAGTTGGG 1132996 Score = 82.4 bits (90), Expect = 6e-11 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACA 108523 ||||||| ||||| | ||||| ||||||| | | |||||| ||||| || || | Sbjct 1210120 AGTGGGTCAGGGATCATCGTGTTCATCACAAGTTCACCGACACGGACGCCGATCCGCATA 1210179 Query 108524 ACGC-CAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCC 108582 |||| |||| | || |||| ||||||||| |||| ||||| || || |||| | ||| Sbjct 1210180 ACGCGCAAC-GTGGATTCTTCTTCTCGCACATGGGCTGGCTGTTGCTGCGCAAGCATCCC 1210238 Query 108583 GACGTGATC 108591 ||||||||| Sbjct 1210239 GACGTGATC 1210247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381753360367632