Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq18 201 4e-46 seq28 179 1e-39 seq224 143 1e-28 seq413 125 3e-23 seq168 118 4e-21 seq13 118 4e-21 seq299 93.3 2e-13 >seq18 Length=3507878 Score = 201 bits (222), Expect = 4e-46 Identities = 851/1319 (65%), Gaps = 45/1319 (3%) Strand=Plus/Plus Query 451177 TGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAAC 451236 ||| || ||| | | || ||||| | ||| ||||| | || ||||| || | || || Sbjct 784248 TGTTGTGAATGATGATGGCAAGCCTAAGATTAAAGTACAGTACAAAGGAGAGATGAAGAC 784307 Query 451237 TTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACA 451296 ||| ||||||||| | || ||||| || |||||||| || || || || Sbjct 784308 TTTCTTCCCTGAAGAAGTGAGTTCAATGGTCCTGGTAAAAATGAAGGAGACTGCTGAGGC 784367 Query 451297 ATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGC 451356 ||| |||| | || ||| |||| || || ||||| || ||||| ||||| || | Sbjct 784368 ATACCTTGGAAAGACCGTCACTAATGCTGTGATCACTGTACCTGCTTACTTCAACGACTC 784427 Query 451357 ACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTAT 451416 || || || ||||| || || || || ||| | || ||||| ||| | || ||||| Sbjct 784428 GCAGCGTCAGGCAACCAAGGACGCTGGCACCATTTCGGGCTTAAACGTTTTACGTATTAT 784487 Query 451417 TAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGa 451476 || || || || || || || | || || || || ||| || |||| || | || Sbjct 784488 CAACGAGCCCACTGCGGCCGCCATTGCTTACGG-CTTGGACAAG--AAAGCCACTGGCGA 784544 Query 451477 aaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT 451536 | || | || | || || |||| || || || ||| ||| | || |||| Sbjct 784545 ACGCAACGTCCTAATTTTCGACCTTGGCGGTGGCACCTTCGATGTATCTATTCTGACAAT 784604 Query 451537 TGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 |||||||| | ||||| || ||| | || || |||||||| || || |||||||| Sbjct 784605 CGAAGATGGCATCTTTGAGGTCAAGTCCACAGCAGGAGATACTCACCTTGGTGGTGAAGA 784664 Query 451597 TATTGATAATGCAATTGTGGAATGGTTGAAAACTGATGTTCAA-CGAAAACTAAAAGTA- 451654 | ||||||| || || ||| | | | |||||| || ||| || ||| | Sbjct 784665 TTTTGATAACCGCATGGTC-AATCACTTCGTTCAGGAGTTCAAGCGTAAA-TACAAGAAA 784722 Query 451655 GATATTTCTACTAACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAA 451714 ||| || | |||| | || ||| | ||||||| ||| | || |||||| Sbjct 784723 GATCTTACCGCTAATAAGCGTGCCCTTCGTCGTCTTAGAACTGCTTGTGAGCGTGCTAAA 784782 Query 451715 ATTACACTCAGT-----TCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATG 451769 ||||| || || || ||| | | |||| | |||||| | ||| | Sbjct 784783 CG--CACTCTGTCATCGTCTACTCAAGCGA---GTATTGAAATTGATTCCCTCTATGAGG 784837 Query 451770 GAATGGA-TTATGCTACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATT 451828 |||| || || | | ||| | | ||| | ||| || ||| |||| | | | Sbjct 784838 GAATTGACTTCTAC-ACTTCGATCACCAGGGCTCGTTTCGAAGAGCTTTGCGCTGATCTG 784896 Query 451829 TTTGCACGGGTAATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGAT 451888 ||| | | | | | || || || || | | | ||| ||||||| || | | Sbjct 784897 TTTAGAGGAACACTTGAGCCAGTAGAGAAATCACTGCGTGACGCTAAAATGGACAAGGCT 784956 Query 451889 AAAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATG 451948 ||||| |||| ||||| | || || || || ||||| |||||||| || || | || Sbjct 784957 CAAATTCATGACATTGTCTTGGTTGGTGGATCCACACGTATTCCTAAGATCCAGAAGCTG 785016 Query 451949 TTGT----CTTCTTATTTTGGA-GGAA---AACAACTATGTAAGAGCGTAAATCCTGATG 452000 ||| |||||| | | | |||| ||||| || || | || ||||||| Sbjct 785017 TTGCAAGACTTCTTCAATGGCAAGGAATTGAACAA--ATCTA------TCAACCCTGATG 785068 Query 452001 AAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA-TGAA 452059 |||||||||| || || ||||| || ||||| ||||| || || | | | | | |||| Sbjct 785069 AAGCTGTTGCTTACGGAGCTGCTGTCCAAGCTGCTAT-CTTGCATGGTGATAAGTCTGAA 785127 Query 452060 AAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCT 452119 || || ||| | || | | ||||| || ||||| || ||||| ||||||| ||| Sbjct 785128 GAAGTACAGGATCTGTTGCTTCTTGATGTTACGCCTCTGTCCCTTGGTATTGAAACTGCT 785187 Query 452120 GGTGGAATGATGACTAATTTAATTAAACGAGGAACTT--CTATTCCTTGTAAAAAGAGTC 452177 ||||| | |||||| | | || || |||||| | | ||||| ||| ||| | Sbjct 785188 GGTGGTGTCATGACTGCTCTTATCAA--GAGGAATTCGACCATTCCAACAAAACAGACAC 785245 Query 452178 AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAG 452237 ||||||| | || ||||||||||| |||||| || ||||| | ||||||| Sbjct 785246 AAACATTCACCACTTTTGCCGATAACCAACCTGGTGTATTGATCCAAGTCTACGAAGGAG 785305 Query 452238 AACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTC 452297 | |||||||||||| || || || |||| ||||| || ||||| | Sbjct 785306 AGCGTGCAATGACAAAGGACAACAACCTGTTAGGTAAATTTGAGCTAAGTGGAATTCCAC 785365 Query 452298 CTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTC 452357 | || | ||| ||||||||| ||| |||| | || | ||||| |||||||||| Sbjct 785366 CAGCACCCCGAGGAGTTCCTCAAATCGAAGTTACATTCGACATCGATGCCAATGGTATTC 785425 Query 452358 TTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAAT 452416 | || || | |||||| || ||||| |||| || |||| ||||| || || || ||| Sbjct 785426 TGAACGTCACTGCAGTGGACAAATCTACTGG-CAAGGAGAACAAAATCACCATCACCAAT 785484 Query 452417 GATAAAAACCGT-TTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAAT 452474 || || |||| ||| | || || || || || | |||||| | ||||| || |||| Sbjct 785485 GACAAGGGCCGTCTTAGC-AAGGAGGAAATCGAGAGAATGGTCAACGAAGCTGAGAAAT 785542 >seq28 Length=1782156 Score = 179 bits (198), Expect = 1e-39 Identities = 174/224 (78%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| ||| ||||||||||||| || || ||||| ||||| |||| Sbjct 1078265 ATGCAGATCTTTGTTAAGACATTGACTGGTAAAACAATAACCCTTGAGGTTGAGGCATCA 1078206 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | | ||| |||||||||||||||||||||||| || || || || Sbjct 1078205 GATACCATTGAAAATGTCAAAGCAAAAATTCAAGATAAGGAAGGAATCCCACCAGACCAG 1078146 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | ||||| ||| | || ||||||||||||||||| | || | | ||||| || Sbjct 1078145 CAAAGATTAATCTTCGCTGGTAAACAACTTGAAGATGGGCGCACACTTTCAGATTACAAC 1078086 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| ||||||||||| | ||| | |||||||||| Sbjct 1078085 ATTCAGAAGGAATCAACACTTCACCTTGTACTCCGACTGAGAGG 1078042 Score = 145 bits (160), Expect = 3e-29 Identities = 169/226 (75%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || || || || |||||||| ||| | || |||||| | || Sbjct 1077125 ATGCAAATTTTCGTTAAGACTCTTACAGGAAAAACTATCACTTTGGAAGTTGAAGCTTCA 1077066 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | ||| ||||||||||||||||||||||| || || ||||| Sbjct 1077065 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCACCAGATCAG 1077006 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAG--AACTTTGGCGGATTATA 391227 || | || |||||| | || |||||||| || || || | ||||| | ||||| | Sbjct 1077005 CAGAGATTGATTTTCGCTGGTAAACAACTCGAGGACGGGCGTATACTTT--CTGATTACA 1076948 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 | ||| | ||||| | ||||||||| | ||| | |||||||||| Sbjct 1076947 ACATTCAAAAGGAATCTACACTTCACCTTGTACTTCGACTGAGAGG 1076902 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || ||||| || ||| | || || ||| | ||| Sbjct 1076897 ATGCAAATCTTCGTCAAGACTCTTACAGGAAAAACCATCACTTTGGAAGTCGAAGCCTCT 1076838 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||||||||||||||||||||| || || ||||| Sbjct 1076837 GACACTATTGAAAATGTCAAAGCCAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAG 1076778 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || ||||||||||| ||||| | || | | ||||| || Sbjct 1076777 CAGAGATTGATCTTCGCTGGTAAACAACTTGAGGATGGGCGCACACTTTCAGATTACAAC 1076718 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| ||||||||||| | ||| | |||||||||| Sbjct 1076717 ATTCAGAAGGAATCAACACTTCACCTTGTACTTCGACTGAGAGG 1076674 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || || || ||||| || ||| | || |||||| | ||| Sbjct 1077809 ATGCAAATCTTTGTTAAGACTCTCACAGGAAAAACCATCACTTTGGAAGTTGAAGCCTCT 1077750 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || |||||||||||||||||||||||| || || || || Sbjct 1077749 GACACTATTGAGAATGTAAAGGCAAAAATTCAAGATAAGGAAGGAATCCCACCAGACCAG 1077690 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | || ||||||||||| |||||| | || | | ||||||||| Sbjct 1077689 CAAAGATTGATCTTCGCTGGTAAACAACTTGAGGATGGACGCACACTTTCAGATTATAAT 1077630 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || || ||| | ||| | |||||||||| Sbjct 1077629 ATTCAGAAGGAATCTACTCTCCACCTTGTACTTCGACTGAGAGG 1077586 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || ||||| || || || || ||||| || || | || |||||| |||| Sbjct 1078037 ATGCAAATCTTTGTTAAGACTCTCACAGGAAAAACGATCACCTTGGAAGTTGAAGCATCC 1077978 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || |||||||||||||||||||||||| || || ||||| Sbjct 1077977 GACACTATTGAGAATGTAAAGGCAAAAATTCAAGATAAGGAAGGAATCCCACCAGATCAG 1077918 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || ||||||||||| ||||| | || | | ||||||||| Sbjct 1077917 CAGAGATTGATCTTCGCTGGTAAACAACTTGAGGATGGGCGCACACTTTCAGATTATAAT 1077858 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| |||||||||| | ||| | |||||||||| Sbjct 1077857 ATTCAGAAGGAATCAACACTTCATCTTGTACTCCGACTGAGAGG 1077814 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || ||||| |||||| | || |||||| |||| Sbjct 1076669 ATGCAAATCTTCGTCAAGACTCTTACAGGAAAAACCATTACTTTGGAAGTTGAAGCATCG 1076610 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| ||||||||| || || ||||||||||| || ||||| Sbjct 1076609 GACACTATTGAGAATGTAAAAGCAAAAATTCAGGACAAAGAAGGAATTCCGCCAGATCAG 1076550 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || || | || || |||||||||||||| | || | | |||||||| Sbjct 1076549 CAGAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGGCGCACACTTTCTGATTATAAC 1076490 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || |||| ||||| ||||| | |||| ||||| Sbjct 1076489 ATTCAGAAAGAATCAACTCTTCATTTAGTTCTTCGACTTAGAGG 1076446 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || || || ||||| || ||| | || |||||| | || Sbjct 1077353 ATGCAAATTTTCGTCAAGACTCTTACAGGAAAAACCATCACTTTGGAAGTTGAAGCTTCA 1077294 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | ||| ||||||||||||||||||||||| || || ||||| Sbjct 1077293 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCACCCGATCAG 1077234 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || |||||| | || |||||||| || || ||| | || | | ||||| || Sbjct 1077233 CAGAGATTGATTTTCGCTGGTAAACAACTCGAGGACGGACGTACACTTTCTGATTACAAC 1077174 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || |||||| | ||| | || |||| || Sbjct 1077173 ATCCAGAAGGAATCTACTCTTCACCTTGTACTCCGATTGAGGGG 1077130 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || ||||| || ||| | || |||||| | || Sbjct 1077581 ATGCAAATCTTCGTTAAGACTCTTACAGGAAAAACCATCACTTTGGAAGTTGAAGCTTCA 1077522 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | | ||| ||||||||||||||||||||||| || || ||||| Sbjct 1077521 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCACCCGATCAG 1077462 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || |||||| | || |||||||| || || ||| | || | | ||||| || Sbjct 1077461 CAGAGATTGATTTTCGCTGGTAAACAACTCGAGGACGGACGTACACTTTCTGATTACAAC 1077402 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || |||||| | ||| | || |||| || Sbjct 1077401 ATCCAGAAGGAATCTACTCTTCACCTTGTACTCCGATTGAGGGG 1077358 >seq224 Length=672938 Score = 143 bits (158), Expect = 1e-28 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||| |||||||| ||| |||| | | | ||||| | |||| || || ||| Sbjct 11030 AAAATGAAGGAAACAGCTGAAGCATATTTAAATACGCCAGTAAAAAATGCTGTGATCACT 10971 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 ||||| || ||||| |||||| ||||| | |||||||| |||||||| || || || || Sbjct 10970 GTTCCTGCATATTTTAATGATTCACAAAGACAAGCAACAAAAGATGCTGGTCAAATCTCT 10911 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || | ||||| ||| || | ||||| ||||| |||||||||||||| |||||||| | Sbjct 10910 GGCCTTAATGTACTTAGAGTGATTAACGAACCAACAGCAGCTGCTCTGGCATATGGCATG 10851 Query 451454 GGAAAATCAAAAGA 451467 | ||| || |||| Sbjct 10850 GACAAAACAGAAGA 10837 >seq413 Length=693780 Score = 125 bits (138), Expect = 3e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || |||||||| ||||| ||||| || ||| | || Sbjct 292202 ATGCAGATATTCGTAAAAACCCTCACGGGTAAAACCATTACCCTTGAGGTAGAAGCTTCA 292261 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || ||| || || || ||||||||||||||||| ||||| Sbjct 292262 GACACTATTGAAAATGTGAAGGCAAAGATCCAGGACAAGGAAGGAATTCCTCCAGATCAG 292321 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | |||||| | ||||||||| | ||||||||| | || | | ||||| ||| Sbjct 292322 CAACGACTTATTTTCGCTGGGAAACAATTAGAAGATGGACGCACCCTCTCCGATTACAAT 292381 Query 391230 AT 391231 || Sbjct 292382 AT 292383 >seq168 Length=902209 Score = 118 bits (130), Expect = 4e-21 Identities = 293/436 (67%), Gaps = 23/436 (5%) Strand=Plus/Minus Query 450948 GTGTAGGTGTTTACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAA 451007 |||| |||||||| | ||||||| | |||||| ||||| ||||| |||||| ||| Sbjct 642593 GTGTTGGTGTTTATAAGAATGGAAGAGCAGAAATCATAGCTAATGATCAAGGAAACAGAA 642534 Query 451008 CTACTCCTTCATGGGTAAGTTTTACGGATTCAGAAAGACTTTTA---GGGCAAGCTGCTA 451064 || ||||| | || || || | | | || |||| || | ||||| | Sbjct 642533 TCACACCTTCTTATGTGGCATTCACTGCTGATGGTGAACGTTTAATTGGAGATGCTGCAA 642474 Query 451065 A--ATCAATGGTAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGG 451122 | |||| | | | ||||| | |||| || || | |||||| ||||| |||||||| Sbjct 642473 AGAATCAGTTGACCA--CAAATCCGGAAAATACTGTTTTTGATGCCAAACGGTTAATTGG 642416 Query 451123 CCGTATGTATGAT--GATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTA 451180 | | ||| | |||| |||||||||| | || | || ||||| | | | | | Sbjct 642415 TAGA--GAATGGTCTGATGTTACTGTACAACATGATATCAAGTTCTTCCCATTTAA---A 642361 Query 451181 GTAAATCAAAA----AGGAAAGCCCTATATTCAAGTAAATTATAAAG--GTGAAACTAAA 451234 |||| | |||| || ||| | | |||| |||| ||| || ||||| ||| Sbjct 642360 GTAATTGAAAAGAACAGCAAACCAC-ATATAAGAGTA--TTAGTCAGTGGTGAAGAGAAA 642304 Query 451235 ACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAA 451294 | ||| | ||||||||||| || ||||||||||| ||||||||| ||||| ||||| Sbjct 642303 ATCTTTACACCTGAAGAAATCTCTGCTATGGTTCTTGGTAAAATGAAGGAAACTGCAGAG 642244 Query 451295 CAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGAT 451354 ||| | || ||||||| |||| || | || || || ||||| ||||||||| Sbjct 642243 GCATACTTAGGGAAAAAAGTTACTCATGCTGTTGTCACAGTACCAGCTTACTTCAATGAT 642184 Query 451355 GCACAACGGCAAGCAA 451370 || ||| | |||| || Sbjct 642183 GCTCAAAGACAAGTAA 642168 Score = 107 bits (118), Expect = 8e-18 Identities = 206/298 (69%), Gaps = 12/298 (4%) Strand=Plus/Minus Query 451842 TGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAA 451901 |||| ||||| | |||| ||| | || ||| | || | || | | | ||||||| Sbjct 641537 TGAAGCCTGTACAGAAAGTTTTAGAGGACTCTGACATGAACAAGAAGGATGTGGATGAAA 641478 Query 451902 TTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATT 451961 |||||||||| || || ||||| ||||||| ||| ||||| | || | ||| ||| Sbjct 641477 TTGTGCTTGTTGGCGGATCTACTAGAATTCCCAAAGTTCAACA-AT-TAGTCAAGGAATT 641420 Query 451962 TT--GGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGC 452019 || || || ||| ||| || | | | | |||||||||||||||||||| |||||||| Sbjct 641419 TTTTGGTGGCAAAGAACCATCTCGGGGAATTAATCCTGATGAAGCTGTTGCTTATGGTGC 641360 Query 452020 TGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGA-GATATTCTGT 452078 ||||||||| |||| | | || | || ||| | || || ||| | ||| || Sbjct 641359 TGCAGTTCAGGCAGGTGTACTCTCTGG---AGA----GCAAGATACGGATGCCATTGTGC 641307 Query 452079 TAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAA 452136 | | ||||| | ||||| || | || ||||||| | ||| || | |||||||| Sbjct 641306 TTTTGGATGTTAATCCTCTTACTATGGGTATTGAAACTGTTGGAGGTGTAATGACTAA 641249 >seq13 Length=4112475 Score = 118 bits (130), Expect = 4e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||||||||||| ||||| || || || || || ||| | || Sbjct 3685480 ATGCAGATTTTTGTAAAAACACTGACTGGGAAAACCATCACCCTGGAGGTAGAAGCTTCA 3685539 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | ||| || ||||||||||| |||||||||||||| || || Sbjct 3685540 GACACCATAGAGAACGTGAAAGCGAAGATTCAAGATAAAGAAGGAATTCCTCCAGACCAG 3685599 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || || | || || ||||| ||||| || ||||| | | || || || Sbjct 3685600 CAGCGTTTGATCTTTGCTGGCAAGCAACTGGAAGACGGGAGAACCCTCTCAGACTACAAC 3685659 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | ||||| | || |||||||| || | |||| ||||| ||| || Sbjct 3685660 ATCCAGAAGGAGTCCACGCTTCACTTGGTGCTGCGACTTCGAGGAGGAATGCA 3685712 Score = 98.7 bits (108), Expect = 4e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||| || || || || || || | || Sbjct 3688180 AATGCAGATCTTTGTAAAAACGCTCACAGGGAAAACCATCACCCTGGAGGTAGAGGCTTC 3688239 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | ||| || ||||| ||||| |||||||||||||| || || Sbjct 3688240 AGACACAATAGAAAACGTGAAAGCGAAGATTCAGGATAAAGAAGGAATTCCTCCAGACCA 3688299 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || || | || |||||||| ||||| || ||||| | | || || || Sbjct 3688300 GCAGCGTTTGATCTTTGCTGGCAAACAACTGGAAGACGGGAGAACGCTCTCAGACTACAA 3688359 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTA 391262 || | ||||| | ||| | || ||||||||| Sbjct 3688360 CATCCAAAAGGAGTCTACATTGCATTTAGTATTA 3688393 Score = 93.3 bits (102), Expect = 2e-13 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||| || || || || || || | || Sbjct 3685707 AATGCAAATCTTTGTAAAAACGCTCACAGGGAAAACCATCACCCTGGAGGTAGAGGCTTC 3685766 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | ||| || ||||| ||||| |||||||||||||| || || Sbjct 3685767 AGACACAATAGAAAACGTGAAAGCGAAGATTCAGGATAAAGAAGGAATTCCTCCAGACCA 3685826 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || || | || || ||||| |||||||| ||||| | | || || || Sbjct 3685827 GCAGCGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGGAGAACGCTCTCAGACTACAA 3685886 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | || || | || |||||||| || | |||| ||||| ||| || Sbjct 3685887 CATCCAGAAAGAGTCCACGCTTCACTTGGTGCTGCGACTTCGAGGAGGAATGCA 3685940 Score = 93.3 bits (102), Expect = 2e-13 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||| || || | || || || | || Sbjct 3687040 AATGCAAATCTTTGTAAAAACGCTCACAGGGAAAACCATCACCTTGGAGGTAGAGGCTTC 3687099 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | || ||| ||||||||||| |||||||||||||| || || Sbjct 3687100 AGACACAATAGAGAATGTGAAGGCAAAGATTCAAGATAAAGAAGGAATTCCTCCAGACCA 3687159 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || || | || || ||||| |||||||| ||||| | | || || || Sbjct 3687160 GCAGCGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGGAGAACGCTCTCAGACTACAA 3687219 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | || || | || |||||||| || | |||| ||||| ||| || Sbjct 3687220 CATCCAGAAAGAGTCCACGCTTCACTTGGTGCTGCGACTTCGAGGAGGAATGCA 3687273 Score = 93.3 bits (102), Expect = 2e-13 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||| || || | || || || | || Sbjct 3687724 AATGCAAATCTTTGTAAAAACGCTCACAGGGAAAACCATCACCTTGGAGGTAGAGGCTTC 3687783 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | || ||| ||||||||||| |||||||||||||| || || Sbjct 3687784 AGACACAATAGAGAATGTGAAGGCAAAGATTCAAGATAAAGAAGGAATTCCTCCAGACCA 3687843 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || || | || || ||||| |||||||| ||||| | | || || || Sbjct 3687844 GCAGCGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGGAGAACGCTCTCAGACTACAA 3687903 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | || || | || |||||||| || | |||| ||||| ||| || Sbjct 3687904 CATCCAGAAAGAGTCCACGCTTCACTTGGTGCTGCGACTTCGAGGAGGAATGCA 3687957 Score = 93.3 bits (102), Expect = 2e-13 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||| || || || || || || | || Sbjct 3687952 AATGCAGATCTTTGTAAAAACGCTCACAGGGAAAACCATCACCCTGGAGGTAGAGGCTTC 3688011 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | ||| || ||||| ||||| |||||||||||||| || || Sbjct 3688012 AGACACAATAGAAAACGTGAAAGCGAAGATTCAGGATAAAGAAGGAATTCCTCCAGACCA 3688071 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || || | || || ||||| |||||||| ||||| | | || || || Sbjct 3688072 GCAGCGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGGAGAACGCTCTCAGACTACAA 3688131 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | || || | || |||||||| || | |||| ||||| ||| || Sbjct 3688132 CATCCAGAAAGAGTCCACGCTTCACTTGGTGCTGCGACTTCGAGGAGGAATGCA 3688185 Score = 89.7 bits (98), Expect = 2e-12 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || |||| || || || || || || | || Sbjct 3687496 AATGCAGATCTTTGTAAAAACGCTCACGGGGAAAATCATCACCCTGGAGGTAGAGGCTTC 3687555 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | ||| || ||||||||||| |||||||| ||||| || || Sbjct 3687556 AGACACAATAGAAAACGTGAAAGCGAAGATTCAAGATAAAGAAGGAATGCCTCCAGACCA 3687615 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || || | || || ||||| ||||| || ||||| | | || || || Sbjct 3687616 GCAGCGTTTGATCTTTGCTGGCAAGCAACTGGAAGACGGGAGAACCCTCTCAGACTACAA 3687675 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | ||||| | || |||||||| || | |||| ||||| ||| || Sbjct 3687676 CATCCAGAAGGAGTCCACGCTTCACTTGGTGCTTCGACTTCGAGGAGGAATGCA 3687729 Score = 84.2 bits (92), Expect = 9e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||| || || || || || ||| | || Sbjct 3687268 AATGCAGATCTTTGTAAAAACGCTCACAGGGAAAACCATCACCCTGGAGGTAGAAGCTTC 3687327 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | || || || |||||||| |||||||||||||| || || Sbjct 3687328 AGACACAATAGAGAACGTGAAGGCGAAGATACAAGATAAAGAAGGAATTCCTCCAGACCA 3687387 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || || | || || ||||| ||||| || ||||| | | || || || Sbjct 3687388 GCAGCGTTTGATCTTTGCTGGCAAGCAACTCGAAGACGGGAGAACGCTCTCAGACTACAA 3687447 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | || || | || |||||||| || | |||| ||||| ||| || Sbjct 3687448 CATCCAAAAAGAGTCCACGCTTCACTTGGTGCTGCGACTTCGAGGAGGAATGCA 3687501 >seq299 Length=124767 Score = 93.3 bits (102), Expect = 2e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| |||||||| ||||| ||||| || || || || ||||| |||| Sbjct 103112 ATGCAGATTTTCGTAAAAACACTCACTGGGAAAACCATCACCCTAGAGGTTGAGGCATCA 103171 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGG 391153 |||| ||||||| | ||||| |||||||||||||| ||||| Sbjct 103172 GATACCATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGG 103215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975612638559224