Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq136 100 3e-16 >seq136 Length=558006 Score = 100 bits (110), Expect = 3e-16 Identities = 134/183 (73%), Gaps = 5/183 (3%) Strand=Plus/Minus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||||| ||||| || ||||| ||||| ||| ||||||||||| || |||||||| Sbjct 338230 TCATCCCTGGAGATCAGTTCATTGCTGAATGTAAGGCCAGGCATGAGACCCCTTTTCTTC 338171 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCG 119636 | |||||| ||||| ||||| ||| ||||||||||| ||||| || || ||| Sbjct 338170 AACCAAAAAATGGCGGCGAAACTACCACTGAAGAAGATGCCTTCCACGGCAGCAAATGCG 338111 Query 119637 AATAGACGCTCAGCAAAAG-GTCGAGACTTGTCG---AACCACTTGAGAGCCCAGTTGGC 119692 | || || |||| |||| | || | |||| | | ||| || || ||||||||||| Sbjct 338110 ATTACCCGTTCAGGGAAAGTGGCG-GTTTTGTGGTTTATCCAATTCAGTGCCCAGTTGGC 338052 Query 119693 CTT 119695 || Sbjct 338051 TTT 338049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588945240728400