Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq136 95.1 1e-14 >seq136 Length=558006 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||| | ||| || |||||||| ||| ||||| ||||||||||||| |||| Sbjct 338232 CCTCATCCCTGGAGATCAGTTCATTGCTGAATGTAAGGCCAGGCATGAGACCCCTTTTCT 338173 Query 117353 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 117412 |||||||| |||| ||| ||| || ||||||||| || ||||| ||||| | Sbjct 338172 TCAACCAAAAAATGGCGGCGAAACTACCACTGAAGAAGATGCCTTCCACGGCAGCAAATG 338113 Query 117413 CAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCCCATTTC 117471 | | | || || | ||| | | | | ||||| || | ||| |||| |||||| || Sbjct 338112 CGATTACCCGTTCAGGGAAAGTG-GCGGTTTTGTGGTTTATCCAATTCAGTGCCCAGTTG 338054 Query 117472 GCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 117515 || ||||| ||| ||||||| | | | || || | |||||| Sbjct 338053 GCTTTCTTAGCAACGCATGGTAGATTCTCAATCGCGTTAAATAA 338010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589949988252720