Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq157 93.3 5e-14 >seq157 Length=411078 Score = 93.3 bits (102), Expect = 5e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923 |||| ||| | ||||| || ||||| || || | ||||| || || | || || Sbjct 378799 TGTCCTGTTTGATGATAACGTACCCGTCAACCAACGGTGTCTTCGAGGAGACAATCAGTG 378740 Query 154924 AGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAA 154983 | || ||| || || || || ||| |||||||| || || || ||||| || | | Sbjct 378739 ACATTTGTTCCATGGTCCACGAAGTTGGAGGTCAGGTGTACCTGGACGGAGCTAACATGA 378680 Query 154984 ATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACT 155043 | || ||||||||||| |||| | || || ||| || || | |||||||| Sbjct 378679 ACGCCCAGGTAGGACTGTGTCGACCAGGCGATTACGGTAGCGACGTGTCCCATCTAAATC 378620 Query 155044 TACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTG 155103 | || ||||| |||||||| || ||||| ||||| |||||||| | || || || || | Sbjct 378619 TGCACAAAACTTTCTGTATACCTCATGGGGGTGGCGGTCCTGGAATGGGACCCATTGGAG 378560 Query 155104 T 155104 | Sbjct 378559 T 378559 Score = 93.3 bits (102), Expect = 5e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 153903 TTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGC 153962 ||||| || ||||| | || ||||| ||| | ||||||||||| ||||| ||||| ||| Sbjct 379941 TTAGCCCTTCAGACGCGTGAACAGCACATCCGAAGAGACAAAGCTACCAGCAACATTTGC 379882 Query 153963 ACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGC 154003 ||||| ||||| ||||||| || ||||||| | | ||||| Sbjct 379881 ACAGCACAGGCGTTGCTGGCGAACATGTCTGCAATGTATGC 379841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579182550611520