Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq97 87.8 2e-12 >seq97 Length=1675059 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/190 (71%), Gaps = 6/190 (3%) Strand=Plus/Plus Query 104865 AAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACT---TGTTAAATGAAATTG 104921 |||||||| ||||| | || || || | ||||||| |||| ||| | | ||| || Sbjct 1318306 AAGAATTACTATGGTTCATAAAGGGATCAACAAATGCTAAAGAACTGTCAGCTAAAAATG 1318365 Query 104922 GTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACT 104981 |||| | ||||||| ||| | || ||| | ||| |||| ||||| || ||| Sbjct 1318366 ---TTAATATCTGGAATGCAAATAGCTCGCGTGAATTTCTAGACTCTTGCGGCTTTACAG 1318422 Query 104982 TTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTC 105041 | || |||| || || |||||||| ||||||||||||| |||||||| ||| || Sbjct 1318423 ATAGAGAAGAGGGCGACTTAGGACCTGTTTATGGATTTCAGTGGAGACACTTTGGTGCAA 1318482 Query 105042 AATATATCGA 105051 | |||| ||| Sbjct 1318483 AGTATAACGA 1318492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658368814892880