Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq18 289 2e-72 seq28 138 9e-27 seq702 129 5e-24 seq168 111 1e-18 seq224 109 4e-18 seq413 104 2e-16 seq46 93.3 3e-13 seq13 89.7 4e-12 >seq18 Length=3507878 Score = 289 bits (320), Expect = 2e-72 Identities = 563/822 (68%), Gaps = 16/822 (2%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 |||||| |||| |||||||| |||||||||||||| | |||| |||| | ||| Sbjct 784639 GGAGATACTCACCTTGGTGGTGAAGATTTTGATAACCGCATGGTCAATCAC--TTCGTTC 784696 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAA---GCTCTTCGTC 551904 | || || || || ||| |||| ||||| ||| || || || ||||||| Sbjct 784697 AGGAGTTCAAGCGTAAATACAAGAAAGATCT---TACCGCTAATAAGCGTGCCCTTCGTC 784753 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 |||| ||||||||||| || | || ||||| |||| ||||| ||||||| | | || Sbjct 784754 GTCTTAGAACTGCTTGTGAGCGTGCTAAACGCACTCTGTCATCGTCTACTCAAGCGAGTA 784813 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 ||||| | ||||| | | |||||||||||| | | || | || | ||||| | Sbjct 784814 TTGAAATTGATTCCCTCTATGAGGGAATTGACTTCTACACTTCGATCACCAGGGCTCGTT 784873 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAA 552084 | ||||| |||| ||||||| |||||| |||| |||| |||||||| || | Sbjct 784874 TCGAAGAGCTTTGCGCTGATCTGTTTAGAGGAACACTTGAGCCAGTAGAGAAATCACTGC 784933 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 | || | || || || || | || | ||||| ||||| | ||||||||||| ||| Sbjct 784934 GTGACGCTAAAATGGACAAGGCTCAAATTCATGACATTGTCTTGGTTGGTGGATCCACAC 784993 Query 552145 GAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | |||||||| || | | |||| ||| ||| |||||||| || |||| || | Sbjct 784994 GTATTCCTAAGATCCAGAAGCTGTTGCAAG-ACTT-CTTCAATGGCAAGGAATTGAACAA 785051 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | | || || ||||| |||||||| || || || || | ||||| |||| |||| | Sbjct 785052 ATCTATCAACCCTGATGAAGCTGTTGCTTACGGAGCTGCTGTCCAAGCTGCTA-TCTTGC 785110 Query 552263 -TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 ||| | | |||| || |||| || | | ||| | |||||||| ||||| || | Sbjct 785111 ATGGTGATAAGTCTGAAGAAGTACAGGATCTGTTGCTTCTTGATGTTACGCCTCTGTCCC 785170 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 ||||| | ||||| | ||| ||| | |||||| ||||||| | || ||| | || |||| Sbjct 785171 TTGGTATTGAAACTGCTGGTGGTGTCATGACTGCTCTTATCAAGAGGAATTCGACCATTC 785230 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | ||| | | | ||| | || | | | ||||| ||| ||| ||| || | Sbjct 785231 CAACAAAACAGACACAAACATTCACCACTTTTGCCGATAACCAACCTGGTGTATTGATCC 785290 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 || | | |||||||| | | | || || || || || | | |||| ||| | Sbjct 785291 AAGTCTACGAAGGAGAGCGTGCAATGACAAAGGACAACAACCTGTTAGGTAAATTTGAGC 785350 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 || || ||||| || || || || ||||| || ||||| |||||||| ||||| |||| Sbjct 785351 TAAGTGGAATTCCACCAGCACCCCGAGGAGTTCCTCAAATCGAAGTTACATTCGACATCG 785410 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTA 552603 |||||||||| ||| |||| || ||||| || ||||||| Sbjct 785411 ATGCCAATGGTATTCTGAACGTCACTGCAGTGGACAAATCTA 785452 >seq28 Length=1782156 Score = 138 bits (152), Expect = 9e-27 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || || || | |||||| || |||||| ||| || ||||||| || || Sbjct 1076449 CTAAGTCGAAGAACTAAATGAAGAGTTGATTCTTTCTGAATGTTATAATCAGAAAGTGTG 1076508 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||||||||| ||||| ||||| || | ||| |||||||| || ||||||||| Sbjct 1076509 CGCCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGCGGAATTCCT 1076568 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432 ||||| || ||||||||| |||||| |||||| || || | || | | ||| | Sbjct 1076569 TCTTTGTCCTGAATTTTTGCTTTTACATTCTCAATAGTGTCCG-ATGCTTCAACTTCCAA 1076627 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| ||||| || |||||||| || ||||| ||||||||| Sbjct 1076628 AGTAATGGTTTTTCCTGTAAGAGTCTTGACGAAGATTTGCATA 1076670 Score = 132 bits (146), Expect = 4e-25 Identities = 165/224 (74%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || |||||||| ||||| ||| ||| || ||| |||||||||| || | Sbjct 1076905 CTCAGTCGAAGTACAAGGTGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAAAGTATA 1076964 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | || || |||||||| || || ||||| | ||| |||||||| || || |||||| Sbjct 1076965 CGCCCGTCCTCGAGTTGTTTACCAGCGAAAATCAATCTCTGCTGATCTGGTGGGATTCCT 1077024 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGA 563431 || |||||||||||||| ||| || ||||| ||||| || | || ||| | Sbjct 1077025 TCCTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTATC--TGAAGCTTCAACTTCCA 1077082 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | |||||| || |||||||| |||||||||||||||||| Sbjct 1077083 AAGTGATAGTTTTTCCTGTAAGAGTCTTAACGAAAATTTGCATA 1077126 Score = 131 bits (144), Expect = 1e-24 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319 ||||||||||| ||||| ||| ||| || || |||||||||| || || | | Sbjct 1077139 CGGAGTACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGTGTACGTCCG 1077198 Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 || || |||||||| || || ||||| | ||| |||||||| || || |||||||| ||| Sbjct 1077199 TCCTCGAGTTGTTTACCAGCGAAAATCAATCTCTGCTGATCGGGTGGGATTCCTTCCTTA 1077258 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAA 563437 ||||||||||| ||| || ||||| ||||| || | || ||| | ||| | Sbjct 1077259 TCTTGAATTTTAGCTTTGACATTTTCAATAGTATC--TGAAGCTTCAACTTCCAAAGTGA 1077316 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || |||||||| || ||||||||||||||| Sbjct 1077317 TGGTTTTTCCTGTAAGAGTCTTGACGAAAATTTGCATA 1077354 Score = 131 bits (144), Expect = 1e-24 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319 ||||||||||| ||||| ||| ||| || || |||||||||| || || | | Sbjct 1077367 CGGAGTACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGTGTACGTCCG 1077426 Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 || || |||||||| || || ||||| | ||| |||||||| || || |||||||| ||| Sbjct 1077427 TCCTCGAGTTGTTTACCAGCGAAAATCAATCTCTGCTGATCGGGTGGGATTCCTTCCTTA 1077486 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAA 563437 ||||||||||| ||| || ||||| ||||| || | || ||| | ||| | Sbjct 1077487 TCTTGAATTTTAGCTTTGACATTTTCAATAGTATC--TGAAGCTTCAACTTCCAAAGTGA 1077544 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || |||||||| |||||||| ||||||||| Sbjct 1077545 TGGTTTTTCCTGTAAGAGTCTTAACGAAGATTTGCATA 1077582 Score = 131 bits (144), Expect = 1e-24 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || |||||||| || || ||| ||| || |||||| ||||| | || || Sbjct 1077589 CTCAGTCGAAGTACAAGGTGGAGAGTAGATTCCTTCTGAATATTATAATCTGAAAGTGTG 1077648 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||| ||||||||||| || || || || | ||||||||| || || || |||||| Sbjct 1077649 CGTCCATCCTCAAGTTGTTTACCAGCGAAGATCAATCTTTGCTGGTCTGGTGGGATTCCT 1077708 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || ||||||||||||||| ||||| |||||| || |||| | | ||| | | Sbjct 1077709 TCCTTATCTTGAATTTTTGCCTTTACATTCTCAATAGTGTCAGAGGCTTCAACTTCCAAA 1077768 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | ||||| || || ||||| ||||| || ||||||||| Sbjct 1077769 GTGATGGTTTTTCCTGTGAGAGTCTTAACAAAGATTTGCATA 1077810 Score = 125 bits (138), Expect = 6e-23 Identities = 163/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || ||||||||||||||||| || ||| || |||||| ||||| | || || Sbjct 1077817 CTCAGTCGGAGTACAAGATGAAGTGTTGATTCCTTCTGAATATTATAATCTGAAAGTGTG 1077876 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||| ||||||||||| || || || || | ||| |||||||| || || |||||| Sbjct 1077877 CGCCCATCCTCAAGTTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGGATTCCT 1077936 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432 || ||||||||||||||| ||||| |||||| || || | || | | ||| | Sbjct 1077937 TCCTTATCTTGAATTTTTGCCTTTACATTCTCAATAGTGTC-GGATGCTTCAACTTCCAA 1077995 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | ||||| || || ||||| ||||| || ||||||||| Sbjct 1077996 GGTGATCGTTTTTCCTGTGAGAGTCTTAACAAAGATTTGCATA 1078038 Score = 120 bits (132), Expect = 2e-21 Identities = 162/223 (73%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || |||||||| ||||| || ||| || ||| |||||||| | || || Sbjct 1076677 CTCAGTCGAAGTACAAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCTGAAAGTGTG 1076736 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||| ||||||||||| || || || || | ||| |||||||| || || |||||| Sbjct 1076737 CGCCCATCCTCAAGTTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCT 1076796 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 || |||||||||||||| ||| || ||||| || |||| | | | | ||| | Sbjct 1076797 TCCTTATCTTGAATTTTGGCTTTGACATTTTCAATAGTGTCAGAG-GCTTCGACTTCCAA 1076855 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | ||||| || |||||||| || ||||| ||||||||| Sbjct 1076856 AGTGATGGTTTTTCCTGTAAGAGTCTTGACGAAGATTTGCATA 1076898 Score = 118 bits (130), Expect = 9e-21 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || ||||||||||| ||||| || ||| || ||| |||||||| | || || Sbjct 1078045 CTCAGTCGGAGTACAAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAATCTGAAAGTGTG 1078104 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||||||||||||||| || || || || | ||||||||| || || || |||||| Sbjct 1078105 CGCCCATCTTCAAGTTGTTTACCAGCGAAGATTAATCTTTGCTGGTCTGGTGGGATTCCT 1078164 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432 || ||||||||||||||| ||| || ||||| ||||| | || | | || || Sbjct 1078165 TCCTTATCTTGAATTTTTGCTTTGACATTTTCAATGGTATCTG-ATGCCTCAACCTCAAG 1078223 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||||||||||| | || ||||| || || ||||| Sbjct 1078224 GGTTATTGTTTTACCAGTCAATGTCTTAACAAAGATCTGCAT 1078265 >seq702 Length=73976 Score = 129 bits (142), Expect = 5e-24 Identities = 243/351 (69%), Gaps = 10/351 (3%) Strand=Plus/Plus Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 ||| || || |||||||||||||| ||||||||||| |||| || || || ||||| || Sbjct 13787 AGTCTTTGACTGCTGGTTTGAATCTGGTTCTATGCCATATGCACAGATGCACTATCCGTT 13846 Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGAATC 368912 || || |||| |||| || | || || | ||||||||| | |||| Sbjct 13847 CGAACACAAAAAAGACTTCGAGGA-GA-----GTTTTCCAGCTGATTTTATTGGAGAAGG 13900 Query 368913 AATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGA 368972 ||||||||||| ||||| ||||||||||| || |||| |||| || ||| |||| | Sbjct 13901 TATTGATCAAACTCGTGGATGGTTTTATACTCTGCTAGTTATATCAACTGCTCTTTTTGG 13960 Query 368973 TAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAAT-GCATCTGATGGTCAAA 369031 | | | | ||||||| | | | | | ||| || || | ||||||||||| || | Sbjct 13961 AAGAGCTCCATTTAAAAGTCTTGTCGCTAATGG-CTTAATACTAGCATCTGATGGACAGA 14019 Query 369032 AGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTA-ATATTTTAATTGATAAATTTGGT 369090 | ||||| ||| | ||| |||||| | || |||| | | || || | |||| ||| Sbjct 14020 AAATGTCGAAACGCAAGAAGAATTATCCAGACCCTATAGAAATT-GTTAACAAATATGGA 14078 Query 369091 GCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAA 369141 || ||| | | | || |||||| | |||||||| |||| ||| ||| Sbjct 14079 GCAGATGCGCTTCGCTTGTACCTAATTAATTCACCTGTTGTAAGAGCTGAA 14129 >seq168 Length=902209 Score = 111 bits (122), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||||||||||| | ||||| | || ||||| || || ||||||||||| ||||||| Sbjct 642593 GTGTTGGTGTTTATAAGAATGGAAGAGCAGAAATCATAGCTAATGATCAAGGAAACAGAA 642534 Query 550086 CTACTCCATCTTATGTTTCTTTCA---CGGAAACTGAACATTTAGTTGGTGATGCAGCAA 550142 || || |||||||| | |||| | || ||||| |||| |||| ||||| |||| Sbjct 642533 TCACACCTTCTTATGTGGCATTCACTGCTGATGGTGAACGTTTAATTGGAGATGCTGCAA 642474 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 | |||| || ||||| |||||| |||||||||| ||||| |||||||| | Sbjct 642473 AGAATCAGTTGACCACAAATCCGGAAAATACTGTTTTTGATGCCAAACGGTTAATTGGTA 642414 Query 550203 GA 550204 || Sbjct 642413 GA 642412 >seq224 Length=672938 Score = 109 bits (120), Expect = 4e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 552367 GAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAA 552426 ||||||| ||||||||| || ||| || ||||| ||||| | ||| |||| Sbjct 9691 GAAATACAACTATTCCTACAAAGAAAAGTCAAGTATTCTCTACAGCAGCTGATGGGCAAA 9632 Query 552427 CTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAAC 552486 || || |||| || || | |||| ||| || || | |||| |||||||| | | Sbjct 9631 CTCAGGTAGAAATTAAAGTTCATCAAGGTGAACGAGAAATGGCTAACGATAATAAACTTC 9572 Query 552487 TTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAG 552546 | || |||| | | | |||||||| |||||||| || || ||||| ||||| |||| Sbjct 9571 TGGGACAATTTACTCTTGTTGGTATTCCACCTGCTCCACGAGGGGTACCACAAATAGAAG 9512 Query 552547 TTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 |||| || ||||| ||||||||||| || | |||| | ||| | |||||| Sbjct 9511 TTACATTTGATATTGATGCCAATGGCATCGTTCATGTATCCGCTAGGGATAAA 9459 Score = 109 bits (120), Expect = 4e-18 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| || |||||||||||||| |||||| | ||||| || ||||||| Sbjct 10984 ATGCTGTGATCACTGTTCCTGCATATTTTAATGATTCACAAAGACAAGCAACAAAAGATG 10925 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| | || |||| |||||||| ||| | | || || ||||| || || ||||| | Sbjct 10924 CTGGTCAAATCTCTGGCCTTAATGTACTTAGAGTGATTAACGAACCAACAGCAGCTGCTC 10865 Query 550518 TTGCATATGG 550527 | |||||||| Sbjct 10864 TGGCATATGG 10855 Score = 100 bits (110), Expect = 2e-15 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765 ||||| || | | ||| ||||||||||||||||| | | ||| ||||| || || | Sbjct 10855 CCATATGCCAGAGCAGCTGCTGTTGGTTCGTTAATCACTCTAAGTACATTAAGGCCAGAG 10914 Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825 |||| |||||| || ||||| | ||||| |||||||||||||||||||||||| Sbjct 10915 ATTTGACCAGCATCTTTTGTTGCTTGTCTTTGTGAATCATTAAAATATGCAGGAACAGTG 10974 Query 361826 ATCACTGCTTTTT 361838 ||||| || |||| Sbjct 10975 ATCACAGCATTTT 10987 >seq413 Length=693780 Score = 104 bits (114), Expect = 2e-16 Identities = 139/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||||||||| | || || | | |||||| | |||||| || || ||||| Sbjct 292388 TTTGG--ATATTGTAATCGGAGAGGGTGCGTCCATCTTCTAATTGTTTCCCAGCGAAAAT 292331 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 ||||| ||||||||| |||||||||||||| || || || || ||| || || || Sbjct 292330 AAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTCACATTTTC 292271 Query 563406 AATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || || | | ||| || || |||| |||||||| || || ||||| |||| Sbjct 292270 AATAGTGTCTGAAGCTTCTAC-CTCAAGGGTAATGGTTTTACCCGTGAGGGTTTTTACGA 292212 Query 563465 AAATTTGCAT 563474 | || ||||| Sbjct 292211 ATATCTGCAT 292202 >seq46 Length=14164310 Score = 93.3 bits (102), Expect = 3e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 370650 AATGCAACTGATGATGAAATTAAAAAAGCATACAAAAAACTAGCAATGAAATATCATCCT 370709 ||||| || || |||| ||||||||||| || | ||||| || |||| ||||||||| Sbjct 4891866 AATGCCACCGACGATGTGATTAAAAAAGCCTATAGGAAACTGGCTTTGAAGTATCATCCT 4891807 Query 370710 GATAGAAACAAAAGTCCTGATGCTGAAGAAAAGTTTaaaaaaaTTAGCAATGCACATGGT 370769 |||| |||| ||| |||| ||| ||||| ||||| || |||| | | || ||| Sbjct 4891806 GATAAGAACAGAAGCCCTGGTGCAGAAGAGAAGTTCAAGGAAATAGCCGAGGCCTATGAA 4891747 Query 370770 ATTCTTTCTGATCCTGAAAAGAAACAAACTTATGATAGATTTGG 370813 | || |||||| | | |||| | | |||||| |||||||| Sbjct 4891746 GTACTATCTGATGCCAAGAAGAGAGACGTTTATGACAGATTTGG 4891703 >seq13 Length=4112475 Score = 89.7 bits (98), Expect = 4e-12 Identities = 150/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| ||||| || ||| | | ||| || ||||| || | || ||||| |||||| Sbjct 3687247 CAAG-TGAAGCGTGGACTCTTTCTGG--ATGTTGTAGTCTGAGAGCGTTCTCCCATCTTC 3687191 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 ||||| || || ||||| || | | ||||| || ||||||||||||||||||||||| Sbjct 3687190 CAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTATCTTG 3687131 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 ||| ||| || || ||| ||||| || | | ||| | | || || | |||| Sbjct 3687130 AATCTTTGCCTTCACATTCTCTATTGTGTCTGAAGCCTCTACCTCCAAG-GTGATGGTTT 3687072 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || ||||| || || |||||||| Sbjct 3687071 TCCCTGTGAGCGTTTTTACAAAGATTTGCAT 3687041 Score = 89.7 bits (98), Expect = 4e-12 Identities = 150/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 |||| ||||| || ||| | | ||| || ||||| || | || ||||| |||||| Sbjct 3687931 CAAG-TGAAGCGTGGACTCTTTCTGG--ATGTTGTAGTCTGAGAGCGTTCTCCCATCTTC 3687875 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 ||||| || || ||||| || | | ||||| || ||||||||||||||||||||||| Sbjct 3687874 CAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATTCCTTCTTTATCTTG 3687815 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 ||| ||| || || ||| ||||| || | | ||| | | || || | |||| Sbjct 3687814 AATCTTTGCCTTCACATTCTCTATTGTGTCTGAAGCCTCTACCTCCAAG-GTGATGGTTT 3687756 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || ||||| || || |||||||| Sbjct 3687755 TCCCTGTGAGCGTTTTTACAAAGATTTGCAT 3687725 Score = 86.0 bits (94), Expect = 5e-11 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||| || | || ||||| ||||| ||||| || || ||||| || | | Sbjct 3685661 ATGTTGTAGTCTGAGAGGGTTCTCCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAAACGC 3685602 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||| || |||||||||||||||||||||||||| || ||| || ||| || || Sbjct 3685601 TGCTGGTCTGGAGGAATTCCTTCTTTATCTTGAATCTTCGCTTTCACGTTCTCTATGGTG 3685542 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | | ||| || || || | ||||| ||||| || ||||| || ||||| || Sbjct 3685541 TCTGAAGCTTCTAC-CTCCAGGGTGATGGTTTTCCCAGTCAGTGTTTTTACAAAAATCTG 3685483 Query 563472 CATA 563475 |||| Sbjct 3685482 CATA 3685479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029075048517220