Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq136 84.2 3e-11 >seq136 Length=558006 Score = 84.2 bits (92), Expect = 3e-11 Identities = 135/191 (71%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 37011 TCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACT 37070 |||||||||||||||||||||| |||||| |||| | | || || || || | || || Sbjct 338505 TCCGCAACAAATTCTATGTATTGACACATAAGTTTACAATTCATGCCTATCATTTCGACA 338446 Query 37071 GGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAACA 37130 || | || ||| | |||| || ||| ||| |||||||| |||| ||| || Sbjct 338445 GGCAACGCGTCTGTCAAAAATTCTTGTTCGATTTCAACAGCATCCTTAA--TGATTGAC- 338389 Query 37131 ATAACTTCTTC---AGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCA 37187 | ||| ||| || ||| | | ||| | | |||||| |||||| ||||| ||| Sbjct 338388 GTGACTCGTTCGCAAGATGGTTTCTGTATTATGTGTCTAAACATTAAACACGCAAAGTCA 338329 Query 37188 CAATGTAAACC 37198 ||||||||||| Sbjct 338328 CAATGTAAACC 338318 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| || ||| || ||||| ||||||||| | | ||||||||||||||||| ||||| Sbjct 338777 CATCACCCCCCACTTCTGATACTCTCCAACTTTTTTCTCGAAAAAATTTGTCTTACCTTC 338718 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||||| |||||| || ||||| ||||| Sbjct 338717 CAAAGATATATGTTCCATGAAGTCAAACGGATT 338685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592285866255120