Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq97 102 1e-16 >seq97 Length=1675059 Score = 102 bits (112), Expect = 1e-16 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 172396 TCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 172455 || ||||| | ||||| | || || || ||||| || | ||| || | | || | Sbjct 1318303 TCGAAGAATTACTATGGTTCATAAAGGGATCAACAAATGCTAAAGAACTGTCAGCTAAAA 1318362 Query 172456 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 172515 |||||| | ||||||| ||| | || ||||||||| |||| | ||||| ||||| | Sbjct 1318363 ATGTTAATATCTGGAATGCAAATAGCTCGCGTGAATTTCTAGACTCTTGCGGCTTTACAG 1318422 Query 172516 AAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTC 172575 | ||| |||| || || ||||| || ||||||||||||| |||||||| || || Sbjct 1318423 ATAGAGAAGAGGGCGACTTAGGACCTGTTTATGGATTTCAGTGGAGACACTTTGGTGCAA 1318482 Query 172576 AATATATCGACTGTG-ATACAGATTACACAGGACAAGG 172612 | |||| ||| | || | ||||||||||| ||||| Sbjct 1318483 AGTATAACGA-TATGCACTCAGATTACACAAATCAAGG 1318519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632456568230640