Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq273 228 7e-55 seq299 84.2 2e-11 >seq273 Length=5066936 Score = 228 bits (252), Expect = 7e-55 Identities = 287/394 (73%), Gaps = 0/394 (0%) Strand=Plus/Plus Query 34254 GCCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGAT 34313 ||| ||||| ||||| ||||| || |||||| | || | ||| || || || || Sbjct 2605666 GCCATGATAGCCGCACGCTTTACACCCCTGAGATATCGTACCCTTCTTTGCACTGACCAT 2605725 Query 34314 GAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATC 34373 ||||| || || || || || || | || || | || | || || ||||| ||||| Sbjct 2605726 CAGCTCGGTTTCAGGATTATCGCAGGCGGGGCATAGTACGTATTTCCGAATGAATCCATC 2605785 Query 34374 AAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTT 34433 ||| ||||| || || || | ||||||||| ||||| || || |||||||||||||| Sbjct 2605786 AAGGAGGTCTTGCAATTTGGTAGCGTCGTGGGAACCGTTTACAATAAATCGTTCGTTTTT 2605845 Query 34434 GTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGC 34493 | |||||| || || || ||||| || ||||| ||||||||||| ||||| ||| |||| Sbjct 2605846 GAAATCGAATTGAGTCTGGGCGCCAAGTTCGCAGCCGAAGTACTTGGTCGGATAAGTGGC 2605905 Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 ||| | || | || || || | ||| ||| || ||||| || || || || ||||| Sbjct 2605906 CGGTCTGCCGATTGCTTTAGCCACGTCGACCATATTCACGATAACGGTTTTTATACCGTT 2605965 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 ||||| || ||||| || || ||| | ||||||||||||||| |||||||| || Sbjct 2605966 ACCCTTGCCCTCGACTTTCGCCTGGATCCTCGGCATTTTGTAGCGATAGAACGCATCGCT 2606025 Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647 || || || |||||||| || ||||||| ||| Sbjct 2606026 GACGTTACGATTAACGTTGACGCTCCCCATGGTG 2606059 >seq299 Length=124767 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 ||||| |||||| | |||| ||| || |||||||| || |||| |||| | | ||| Sbjct 103282 GATCAGCAAAGATTAATTTTTGCTGGAAAACAGCTAGAAGATGGTCGAACCCTTTCAGAT 103341 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 || || ||||| ||||||||||| ||||| |||| ||| | || ||||| ||| Sbjct 103342 TATAATATTCAGAAAGAATCTACTTTGCATTTGGTCTTACGTCTACGAGGTGGA 103395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412820578363754