Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq64 107 3e-18 >seq64 Length=869071 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 182998 GAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAA 183057 |||||| | || |||||||| | |||||||||| | |||| |||||| ||| | | Sbjct 669602 GAAAAGTCTGAGACACATGATGATTTATGGAATGCGTGTCAAAATCAGATGGTGACAACA 669661 Query 183058 GGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGA 183117 |||||||||||| | ||||| ||||||| ||||| || || ||| | ||||||| | Sbjct 669662 GGAAAAATGCATGGATTTTTGAGAATGTATTGGGCAAAGAAAATATTAGAATGGAGTGAA 669721 Query 183118 ACTCCGGAAGATGCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGT 183177 ||||| ||| ||||||| | || ||| | || ||||| || |||| ||| Sbjct 669722 ACTCCTGAAAATGCTTTACAGTCGGCTAATTATTTAAATAATAAATATAGTATAGATGGT 669781 Query 183178 ACGGATCCTAACGGATACGTAGGT 183201 |||||||| || ||| ||||| Sbjct 669782 TGTGATCCTAATGGCTACATAGGT 669805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903364019350080