Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq136 86.0 8e-12 >seq136 Length=558006 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 ||||||| | ||| || |||||||| ||| || || ||||||||||||| |||| Sbjct 338232 CCTCATCCCTGGAGATCAGTTCATTGCTGAATGTAAGGCCAGGCATGAGACCCCTTTTCT 338173 Query 122738 TCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACG 122797 |||||||| |||| ||| ||| || ||||||||| || ||||| ||||| | Sbjct 338172 TCAACCAAAAAATGGCGGCGAAACTACCACTGAAGAAGATGCCTTCCACGGCAGCAAATG 338113 Query 122798 CAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATTTC 122856 | | | ||||| | ||| | | | | |||| | | ||| |||| |||||| || Sbjct 338112 CGATTACCCGTTCAGGGAAAGTG-GCGGTTTTGTGGTTTATCCAATTCAGTGCCCAGTTG 338054 Query 122857 GCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 122900 || ||||| ||| ||||||| | | | || || | |||||| Sbjct 338053 GCTTTCTTAGCAACGCATGGTAGATTCTCAATCGCGTTAAATAA 338010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627999201028800