Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dufourea_20novaeangliae_20[refseq_20GCF_5F001272555.1_202015-08-21] 4,178 sequences; 279,505,983 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq250 120 4e-22 >seq250 Length=260082 Score = 120 bits (132), Expect = 4e-22 Identities = 174/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 89163 GATTCAGACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAACTT 89222 ||| ||| |||||| | | ||| |||| | || || || |||||||| || ||| Sbjct 30029 GATACAGTAGAATGGGCTGCCTGGCAAGATAGAGGTGACCCGGTGTTGCATATCGA-CTT 30087 Query 89223 AG-GAGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGAT 89281 || || |||||||||| |||| | ||||| ||| || ||||| || || | ||||| Sbjct 30088 AGTGAAGTGGGCTGATTTATTCTTAATCGCCCCATTAGATGCTAACACACTTGGTAAGAT 30147 Query 89282 AGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATATATCAAA 89341 ||||| |||||||||||| || | | |||| | | | || ||| || ||||| Sbjct 30148 AGCTAGTGGTATATGCGATAATATTTTGACTTGCGTCGCACGTGCCTGGAATCCTTCAAA 30207 Query 89342 GCCCCTTATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCTATTACTGAATC 89401 ||| | | ||||||||||| |||||||| ||||||||||| ||| |||||| | | Sbjct 30208 GCCATTGGTGTTTTGTCCTGCTATGAATACAAAGATGTGGGAACACCCTGTTACTGCACC 30267 Query 89402 ACA 89404 ||| Sbjct 30268 ACA 30270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603149298882720