Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq8889 98.7 2e-15 seq4135 98.7 2e-15 seq2502 89.7 1e-12 seq1180 89.7 1e-12 seq1913 87.8 4e-12 >seq8889 Length=568521 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 296768 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 296709 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 296708 CCCACGTTGGGC 296697 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 307817 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 307758 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 307757 CCCACGTTGGGC 307746 >seq4135 Length=160167 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 93299 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 93240 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 93239 CCCACGTTGGGC 93228 >seq2502 Length=269351 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 281730 GGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTC 281789 ||||| || | |||||||| || | | || || ||| || || |||||||| | | Sbjct 88675 GGGTTGAGCATGGTGAAGATGTAACGGGGGCTGGCAGCGTCCTTGCCTCCCTGCAGACGC 88734 Query 281790 GACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGA 281849 | ||||||||||| | |||| || ||| ||||| ||| |||||||| | ||| Sbjct 88735 GTACCAAACTGACCGTTGGGCAGCAGGAGGTTGATGTTGTTGGAGCCGACGTAGTTCTGC 88794 Query 281850 GCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCG 281909 |||||||||| ||| || | ||||| | ||||||||||| || || ||| ||| Sbjct 88795 GCCAGGTTGATGATGGTGGACATGAGCGAGGCTTCACCGTGGTGGTACGCAGAGTGCTCG 88854 Query 281910 GCAACATAACCACTGAACTGTGCTACCTT 281938 || || | ||| | ||| || ||||| Sbjct 88855 GCCACGGAGCCAGCCAGCTGCGCGACCTT 88883 >seq1180 Length=857258 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 533365 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 533424 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 533425 CCCACGTTGGGC 533436 >seq1913 Length=564963 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| | ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 312460 TGCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 312519 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 312520 CCCCACGTTGGGC 312532 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| | ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 330897 TGCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 330956 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 330957 CCCCACGTTGGGC 330969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057701531748680