Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1224 152 6e-32 seq112 125 8e-24 seq3574 122 1e-22 >seq1224 Length=1352561 Score = 152 bits (168), Expect = 6e-32 Identities = 151/195 (77%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 |||||| || |||| ||| || | |||||| || ||||| |||||||| || |||||||| Sbjct 1087474 CTCGAGCCCAGTGATGTGTGCAAGCATGTATGTGAGCAGAGAGTAGCTAGCAATGTTGAA 1087533 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||||| || |||||||| | || |||||||||| ||| || ||||| | | || Sbjct 1087534 CGGCACCCCGAGGCCCATGTCTGCTGAACGCTGGTACATCTGACACGAGAGATAGCGGCG 1087593 Query 145866 C---GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 | |||||||||||||| ||| ||||||||| ||||| |||||||| |||||| Sbjct 1087594 CTCGGCCACGTAGAACTGCACCAGACAGTGGCAGGGGGGCAGAGCCATGGCCCCCAGGTC 1087653 Query 145923 CGCCGGGTTCCAGGC 145937 || || ||||| || Sbjct 1087654 AGCGGGATTCCAAGC 1087668 >seq112 Length=422422 Score = 125 bits (138), Expect = 8e-24 Identities = 180/251 (72%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCT 145747 |||| | ||||||| |||| ||||||||| || | | ||| | ||| || || |||| Sbjct 128861 GCTCGAAGTGGTTGGCATAGAGGTGCGCGTCGCCGAAGGTGTGCACGAACTCGCCCGGCT 128920 Query 145748 CGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGG 145807 | ||| | || |||| ||| || | ||||| |||| ||| |||||||||| Sbjct 128921 GGTAGCCGCAAATCTGAGCGAGCATCATCGTAAACAGGGCGTAGGAGGCAATGTTGAAGG 128980 Query 145808 GCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG 145867 | || ||||| ||||| | ||||||||| ||||||||||| ||| ||| | | Sbjct 128981 GTACGCCCAGAAAGATGTCGGCGCTGCGCTGGTAGAGCTGGCAGGACAGCCTGCCGTCGG 129040 Query 145868 CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG-GCGGGCAGGTCCGCC 145926 | || ||||||||| ||||| ||||||||||| ||||||||| || | | || | Sbjct 129041 CGACATAGAACTGGAACAGGCAATGGCAGGGCGGTAGGGCCATGTGCTCG-ACATCGCCG 129099 Query 145927 GGGTTCCAGGC 145937 ||||||||||| Sbjct 129100 GGGTTCCAGGC 129110 >seq3574 Length=6226 Score = 122 bits (134), Expect = 1e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || || | ||||| |||||||| | ||||||||| |||||||||||||| ||||| Sbjct 3206 TGCGCCAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAAGGGCACGCCCAGGAAA 3147 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGG 145881 ||||| | ||||||||| ||||||||| || ||| | ||||| ||||||||| Sbjct 3146 ATGTCGGCGCTGCGCTGGTAGAGCTGGCAGCTCAGGCGCCCTTCGGCCACATAGAACTGG 3087 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTG 145941 | | | ||||||||| ||||||||| | |||| || ||| |||||||||| || Sbjct 3086 AAGAAGGCATGGCAGGGCACCAGGGCCATCTTGTGCAGTTCGGCCACGTTCCAGGCGCTG 3027 Query 145942 AGGACGA 145948 | || || Sbjct 3026 ACGATGA 3020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590010150825440