Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_001697.1 Length=32355 Score E Sequences producing significant alignments: (Bits) Value seq4979 104 5e-18 seq2001 84.2 5e-12 >seq4979 Length=1283317 Score = 104 bits (114), Expect = 5e-18 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 355 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 414 ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| Sbjct 640747 TTGGTGGGTCGGGCGAGATTCGAACTCGCGACCAACGGATTAAAAGTCCGCTGCTCTACC 640806 Query 415 GACTGAGCTAACGACCC 431 |||||||||| |||||| Sbjct 640807 GACTGAGCTACCGACCC 640823 Score = 102 bits (112), Expect = 2e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 354 ATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTAC 413 ||||||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||||| Sbjct 640665 ATTGGTGGGGCGTGACAGATTCGAACTGTCGACCTACGGATTAAGAGTCCGCTGCTCTAC 640724 Query 414 CGACTGAGCTAACGACCCA 432 | |||||||||||| |||| Sbjct 640725 CAACTGAGCTAACGCCCCA 640743 >seq2001 Length=3286380 Score = 84.2 bits (92), Expect = 5e-12 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 352 TTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCT 411 || |||||||| |||| ||| |||||||| || || | |||||| |||| |||||||| Sbjct 1327344 TTTTTGGTGGGCCGTGTAGGGGTCGAACCTACGGCCCGCTGATTAAGAGTCAGCTGCTCT 1327403 Query 412 ACCGACTGAGCTAACGACCCA 432 ||| |||||||||||| |||| Sbjct 1327404 ACCAACTGAGCTAACGGCCCA 1327424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103403303376344