Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2057 86.0 1e-11 >seq2057 Length=842785 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902 ||||| || ||| | || || |||||||| || |||||||||| ||| ||||||| Sbjct 610077 TGGAGCGTTCATATTTACTGAAGATTGATGGTAAAGTCGTGGAACGTCCTCAACACATGT 610018 Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACA 248962 ||||||| || ||||| || || ||| ||| || || || || |||| || |||| Sbjct 610017 TGATGCGTGTTGCTGTTGGCATCCACGGGGAGGATATTGATGCAGTCATCGATACTTACA 609958 Query 248963 CCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGC 249014 | || |||||||| | || ||||| | || || ||||||||||| Sbjct 609957 ACTTGCTGTCTGAACGCTACTTCACCCATGCTTCTCCTACCCTCTTCAACGC 609906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073642086037248