Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1112 89.7 4e-13 >seq1112 Length=3255245 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| ||||||| ||| | |||||||| || ||| ||||||||||| |||||||| Sbjct 2622941 GCCTCCTCTCAGTCTGAGAACCAAGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGA 2623000 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| ||| | || || || || || || ||||| ||||| ||||| ||||| || || Sbjct 2623001 GAGTGTGCGGCCATCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGG 2623060 Query 45229 CACACCCTCCTTGTCCGCAATTTT 45252 | || ||||||||| ||||| Sbjct 2623061 GATTCCTTCCTTGTCCTGGATTTT 2623084 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| ||| | |||||||| || || ||||||||||| ||||||||| Sbjct 2620685 CCACCTCTCAGTCTGAGAACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAGTCGGAA 2620744 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || || || || || || ||||| ||||| ||||| ||||| || || Sbjct 2620745 AGGGTGCGGCCATCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 2620804 Query 45230 ACACCCTCCTTGTCCGCAATTTT 45252 | || ||||||||| ||||| Sbjct 2620805 ATTCCTTCCTTGTCCTGGATTTT 2620827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395031691849756