Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2057 111 2e-19 seq1224 109 8e-19 seq1813 102 1e-16 >seq2057 Length=842785 Score = 111 bits (122), Expect = 2e-19 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 97177 AACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACA 97236 |||||||| | |||||| | | | ||||| || || || ||||| ||||| ||||||| Sbjct 607943 AACTGTGGTACGCCATCATTCAGTCCCAGGTGGAAACAGGCACTCCCTACATGCTCTACA 607884 Query 97237 AGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATC 97296 | ||| | || ||||| |||||||| || | |||||||||||| || ||||| Sbjct 607883 AAGATGCATGCAACCGCAAGTCCAACCAACAGAACCTTGGCACCATCAAGTGCAGCAATC 607824 Query 97297 TGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 | ||||| || ||||| |||||| |||||| || ||| |||||| || Sbjct 607823 TCTGCACTGAGATTGTGGAGTACAGCTCTCCTGATGAGGTGGCAGTGTG 607775 >seq1224 Length=1352561 Score = 109 bits (120), Expect = 8e-19 Identities = 235/348 (68%), Gaps = 5/348 (1%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 |||||||| || |||||||| || ||||| ||| | |||| ||| || |||| || | Sbjct 1087824 GGCGATCTTGGACCAGTGTATGGCTTCCAATGGCGACACTTTGGCGCCCAGTACCGAGGC 1087765 Query 70127 -TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCT 70185 ||| || ||| | | || ||||| ||||| |||||| | | ||||| ||||| Sbjct 1087764 ATGCACGAG-GACCACGCTACACAAGGTGTGGATCAGTTGCAGCAAGTGATTGAGACTCT 1087706 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245 ||||||||| || | | ||| | ||| | | |||||||| || || || Sbjct 1087705 ACGAACCAATCCAGATGACCGACGCATCATCATGAGTGCTTGGAATCCCGCTGACCTGGG 1087646 Query 70246 CCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAAT- 70304 ||||| || || || || |||||| ||| ||||| ||| | ||| || | Sbjct 1087645 GGCCATGGCTCTGCCCCCCTGCCACTGTCTGGTGCAGTTCTACGTGGCCGAGCGCCGCTA 1087586 Query 70305 --TGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACAT 70362 | || || ||||| ||| | || |||||||||||||| || || || ||||| Sbjct 1087585 TCTCTCGTGTCAGATGTACCAGCGTTCAGCAGACATGGGCCTCGGGGTGCCGTTCAACAT 1087526 Query 70363 TGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCT 70410 ||| ||||| ||| || | || ||||| |||| ||||| || || || Sbjct 1087525 TGCTAGCTACTCTCTGCTCACATACATGCTTGCACACATCACTGGGCT 1087478 >seq1813 Length=735787 Score = 102 bits (112), Expect = 1e-16 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||| || || || || |||||||||||||| || || || ||||| ||||| || ||| Sbjct 440180 GTGGCGTTTGCAGCAGTCGAGGGCATCTTCTTCTCAGGAAGCTTTGCTGCCATTTTCTGG 440239 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 || |||||||| ||||| ||||| || ||||| |||||| ||| | || ||| | || Sbjct 440240 CTAAAGAAGCGTGGACTGATGCCTGGTCTGACATTCAGTAATGAGCTCATTTCTAGGGAT 440299 Query 125550 GAGG 125553 |||| Sbjct 440300 GAGG 440303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740975497363360