Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_004333.2 Length=48247 Score E Sequences producing significant alignments: (Bits) Value seq6557 96.9 1e-15 >seq6557 Length=877522 Score = 96.9 bits (106), Expect = 1e-15 Identities = 78/93 (84%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 17815 GGAGACGTGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGAAC-GCCTGGAGTAATCT 17873 ||||||||||| ||| ||||||| || |||||||||||||||| | | || || || Sbjct 341476 GGAGACGTGGCCGAGAGGTCGAAGGCACTCCCCTGCTAAGGGAGCATGCGGGCAAAACCT 341535 Query 17874 GGGTCGAGGGTTCGAATCCCTCCGTCTCCGCCA 17906 | |||||||||||||||||||||||||||||| Sbjct 341536 GCATCGAGGGTTCGAATCCCTCCGTCTCCGCCA 341568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154252246572088