Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq581 161 4e-35 seq367 134 5e-27 seq7071 127 8e-25 seq5718 107 7e-19 >seq581 Length=20508 Score = 161 bits (178), Expect = 4e-35 Identities = 691/1075 (64%), Gaps = 48/1075 (4%) Strand=Plus/Plus Query 52547 TGAACGTCAGCGTCTGAAAGAGCTGGAGCGTGAAAATCGTGAACTGCGCCGCAGTAACGA 52606 ||||||| | || || || | |||||||||||| || || ||||| ||||| Sbjct 3345 TGAACGTGATCGGCTCAAGGTGCTGGAGCGTGAGGTCAAGGAGCTTCGCCGGGCGAACGA 3404 Query 52607 TATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAAAAA 52666 ||||| ||| |||| || || ||||||||| |||||||| ||||||||| | | ||| Sbjct 3405 GATCCTGCGCAAGGCATCAGCATATTTTGCGCAGGCGGAGCTCGACCGCCACGGCAAATG 3464 Query 52667 ATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGT--CGGACCGCTATGCAGCG 52724 ||||| | | | || | || || || || |||| || ||| | ||| | | Sbjct 3465 GTGATGTCGTTCATCGACGCTCACCGGGA--AGAACTGGGTATCGAGCCGATCTGCCGTG 3522 Query 52725 AACTGCATATTGCCCCGTCAACGTA---TTACCAC--TGTCAGCAACAGCGACATCATCC 52779 ||||| | ||||| || | || | | ||| |||| || ||| ||| Sbjct 3523 AACTGGCGGTCGCCCCATCTTCCTACCATGAACACGCTGTCCGCCTTGCCGA-----TCC 3577 Query 52780 GGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAGATACAGCGCGT 52839 | | || |||||||| | |||||| ||| | | | | | ||| ||||||| Sbjct 3578 CGGCAGGCGTCCGGCCCGTGCCCGGCGCGACGACGAGATAAGCGAGGCGATCAAGCGCGT 3637 Query 52840 ATACGATGAAAATCACAAGG-TATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGG 52898 |||| ||| | | | | || |||| || || ||||||| ||| || || | Sbjct 3638 CCACGA-GAACAGCTTTGGCCTCTATGGTGCCCGCAAGGTCTGGCACCAGATGCGCCGCG 3696 Query 52899 AAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCG 52958 |||| | || |||||| || ||||| |||| ||| || ||| | ||||| || || | Sbjct 3697 AAGGGACCAAAGTGGCTAGGTGCACCGTGGAACGACTGATGCGCGCCATGGGGCTCGCGG 3756 Query 52959 GTGTTCTCCGGGGTAAAAAGGTCCGT-ACGACCATCAGC---CGGAAAGC--CGTTGCCG 53012 | |||| |||||| || ||| | || || || ||||| | ||| || ||| ||| Sbjct 3757 GCGTTCGCCGGGGCAAGAAGA-CGGTGACCACGATCAGTAATCCGAAGGCACCGTGCCCG 3815 Query 53013 CAGGCGACCGCGTAAACCGTCAGTTCGTGG-CAGAACGACCTGACCAGCTGTGGGTGGCT 53071 | |||| || ||||| ||||| || ||| || || | ||||||||||| Sbjct 3816 CT--CGACAAGGTGAACCGCGAGTTCAAGGTCAGC-CGGCCCAATGCGCTGTGGGTGGTC 3872 Query 53072 GATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTG 53131 || || ||||||||| || ||| || |||||||| || || ||| | || |||| Sbjct 3873 GACTTCACTTACGTCCATACCTGGACCGGGTTCGTCTACGTTGCCTTCGTGATCGATGCC 3932 Query 53132 TTTGCCGGATACATTGTGGGGTGGCGGGT---CTCATCGTCCATGGAGACGACATTCGTG 53188 ||||| | || ||||| ||| ||| | | ||| ||| || || |||||| Sbjct 3933 TTTGCTCGGCGGATCGTGGGCTGGAAGGTCAGCACCTCGGCCACGG---CGGGCTTCGTG 3989 Query 53189 CTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACC---GTCC------GGCACGGTC 53239 || ||||| |||||||||||| | ||||| |||| | || ||| | || Sbjct 3990 CTCGATGCCCTGGAGCAGGCGATCCATGCCCGCAGACCCAGGGCCGAGGATGGCCTGATC 4049 Query 53240 CATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAA 53299 || ||||| || ||| ||| ||| | || || |||||| ||||| || || Sbjct 4050 CACCACAGCGACCGGGGTGTTCAATATCTGGCGATGAACTACACCCAGCGCCTGGCCGAG 4109 Query 53300 GCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAG 53359 ||| | || |||| || || |||||| || |||||||| |||| ||| Sbjct 4110 GCCAACCTCGTGCCATCGGTCGGCAGCGTCGGCGACAGCTACGACAACGCCTTGGCCGAG 4169 Query 53360 AGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGC---TGGAAAAACCGT 53416 | ||||| || || ||||| || ||||| || || || || ||| |||| | Sbjct 4170 ACGATCAACGGCCTCTACAAGGCCGAGGTTATCTGGCGCCAGCGCTCATGGCCAAACGCT 4229 Query 53417 GCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTGCTG 53476 | | |||||| |||| || || ||||| ||||||| ||||||| || || | Sbjct 4230 TCGGCGGTGGAAATGGCGACCCTGCGCTGGGTAGACTGGTTCAACAATCACCGCCTGTTC 4289 Query 53477 GAAAGGCTGGGCCACACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGA 53536 | | | || |||| || || || || || ||| || ||||| |||||| Sbjct 4290 GGACCCATCGGGCACATCCCGCCCGCCGAGGCCGAAGCCAACTACTATGCAGCCATCGAG 4349 Query 53537 AACGATGATCTGGCAGCCTGAGTTCACAGATAAAACACTCTCCAGGAAACCCGGG 53591 ||| ||| ||| || ||| | || | ||||| |||| |||| |||||| Sbjct 4350 AACCTCGATATGGTCGCATGA---CTCAAACAAAACTGCCTCCGGGAATCCCGGG 4401 >seq367 Length=21361 Score = 134 bits (148), Expect = 5e-27 Identities = 648/1002 (65%), Gaps = 55/1002 (5%) Strand=Plus/Minus Query 49715 AGCGTCTGAAAGAGCTGGAACGTGAAAATCGTGAACTGCGCCGCAGTAACGATATCCTTC 49774 |||| || || || ||||||| || ||||||||| | ||| ||||| || | | Sbjct 11922 AGCGACTCAAGGAATTGGAACGGGAGAATCGTGAATTAAAGCGCGCCAACGAGATATTGC 11863 Query 49775 GCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAAAAAATGATGCC 49834 | |||| || ||||||||||| |||||||| ||||||||| | |||| |||||| Sbjct 11862 GTAAGGCATCGGCTTATTTTGCCCAGGCGGAGCTCGACCGCCGGTCGAAATGATGATGTT 11803 Query 49835 ACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGCGAACTGCATAT 49894 | | | |||| | | | || ||||||| | || || || | | || | Sbjct 11802 ATTTGTTGATAGAAACAAAGCGGAATATGGGGTCGAGTCAGTCTGTAGACAGATACAGGT 11743 Query 49895 TGCCCCGTCAACGTATTACCATTGTCAGCAACAG---CGA-CATCATCCGGATAAACGCA 49950 ||||||||| | ||||| | || ||| || ||| | |||||||| || | Sbjct 11742 TGCCCCGTCGAGTTATTATGAA---CA-CAAAAGACGCGAGCGAGATCCGGAT---CG-A 11691 Query 49951 GTGCCCGTGCGCAGCACG------ATGACTGGCTGAAGAAA--GAGATACAGCGCGTATA 50002 | || | |||| | | |||| || | |||| || |||||||| |||| Sbjct 11690 TTACCTGATCGCATTAAGCGGGACATGA--GGTT--AGAACTTGATATACAGCGGGTATG 11635 Query 50003 CGATGAAAATCACCAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGG 50062 | || ||| || || || |||| || ||||| ||||| |||||||| || ||||| Sbjct 11634 GAAAGACAATTTCCGCGTTTATGGTGCTCGCAAAGTATGGCGGCAGTTGTTGCGAGAAGG 11575 Query 50063 TATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATG--GCAGTTATGGGACTTGCC-GG 50119 ||| | || || | || || || | ||| | ||| | || | ||| | ||| || Sbjct 11574 TATTGGTGTTGCTCGTTGTACGGTCGAACGGTTGATGAAGAAGCT-TGGAA--TGCAAGG 11518 Query 50120 TGTTCTCCGGGGTAAAAAGGTCCGCACTACCGT--CAGCCGGAAAGCCGTTG-CCG--CA 50174 ||||| || || ||| || | || ||| | | | || || ||| ||| || Sbjct 11517 TGTTCGACGCGGCAAAGAGTGTTGGACAACCATTTCGGACGATTTGC--TTGACCGGCCA 11460 Query 50175 TGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGTCCAGACCAGTTGTGGGTGGCTGAT 50234 ||| || ||||| || || || || || || | || ||||||||||| ||| Sbjct 11459 ACGGACAAGGTTAACCGGCAATTTGTAGCTTCCCGGCCCAATCAATTGTGGGTGGCGGAT 11400 Query 50235 TTTACCTGGGTAAGCACATGGCAGGGCTTCGTTTATGTGGCGTTCATCATTGATGTGTTC 50294 |||||| || || ||| ||||| ||||||||||| || || | ||||| || Sbjct 11399 ATTACCTTTGTGGCGACGTGGATTGGCTTTGTTTATGTGGCTTTTATTACCGATGTATTT 11340 Query 50295 GCCGGATACATCGTGGGATGGCAGGTCTCATCATCCA-TGGAAACAACATTCGTGCTGGA 50353 || |||||||||| || ||| ||| || | || || ||| | | |||||||| Sbjct 11339 GCAAGATACATCGTTGGCTGGAGAGTC-AGTCGTACATTGCGAACGAATCTGGTGCTGGA 11281 Query 50354 TGCACTGGAGCAGGCGTTGTGGGCCCGTCGG----CCGTCCGGCACAATCCATCACAGTG 50409 |||| |||| |||||| | ||||| || ||| ||| | || || |||||||||| Sbjct 11280 TGCATTGGAACAGGCGCTATGGGCACGGCGGGAAACCG-CAGGATTGATACATCACAGTG 11222 Query 50410 ATAAAGGTTCTCAGTATGTATCGCTGGCCTACACGCAGCGGCTTAAGGAAGCCGGATTAC 50469 || ||| |||||| ||||| | ||| ||| |||| || | || || | || Sbjct 11221 ATCGAGGCAGCCAGTATTTATCGATTCGCTATACGGAGCGCCTGATTGAGGC--TAATAT 11164 Query 50470 TG--GCATCAACAGGGAGTACTGGCGACTCGTATGACAACGCGATGGCTGAGAGCATCAA 50527 || || || || |||| ||||| || |||||||| || |||| || | || || Sbjct 11163 TGAAGCTTCTGTTGGCAGTATCGGCGATTCTTATGACAATGCACTGGCCGAAACGATTAA 11104 Query 50528 TGGTCTTTACAAAGCGGAGGTAAT---ACACCGTAAGAGCTG--GAAAAACCGGACAGAA 50582 || | ||||| | ||||| || ||| || || | || | | ||| || Sbjct 11103 CGGATTATACAAGACCGAGGTTATTCGACATCGCGGCCCTTGGCGCAATATC-GAC-GAT 11046 Query 50583 GTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGG 50642 ||||| | || || | ||||| || |||| |||||| ||| || ||||||| Sbjct 11045 GTGGAGTTTGCGACCTTGGAATGGGTAGATTGGTTTAACAACCGAAGACTGCTGGAGCCC 10986 Query 50643 CTGGGCCATATTCCTCCGGCAGAAGCAGAAAAAGCTTATTAT 50684 | || ||||||| ||| ||||| |||| || |||||| Sbjct 10985 ATCGGAAATATTCCGCCGTCAGAATTTGAAATGGCCTATTAT 10944 Score = 122 bits (134), Expect = 3e-23 Identities = 556/861 (65%), Gaps = 42/861 (5%) Strand=Plus/Minus Query 52555 AGCGTCTGAAAGAGCTGGAGCGTGAAAATCGTGAACTGCGCCGCAGTAACGATATCCTTC 52614 |||| || || || |||| || || ||||||||| | ||| ||||| || | | Sbjct 11922 AGCGACTCAAGGAATTGGAACGGGAGAATCGTGAATTAAAGCGCGCCAACGAGATATTGC 11863 Query 52615 GCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAAAAAATGATGCC 52674 | |||| || ||||||||||| |||||||| ||||||||| | |||| |||||| Sbjct 11862 GTAAGGCATCGGCTTATTTTGCCCAGGCGGAGCTCGACCGCCGGTCGAAATGATGATGTT 11803 Query 52675 ACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATAT 52734 | | | |||| | | | || ||||||| | | || || | | || | Sbjct 11802 ATTTGTTGATAGAAACAAAGCGGAATATGGGGTCGAGTCAGTCTGTAGACAGATACAGGT 11743 Query 52735 TGCCCCGTCAACGTATTACCACTGTCAGCAACAG---CGA-CATCATCCGGATAAACGCA 52790 ||||||||| | ||||| | || ||| || ||| | |||||||| || | Sbjct 11742 TGCCCCGTCGAGTTATTATGAA---CA-CAAAAGACGCGAGCGAGATCCGGAT---CG-A 11691 Query 52791 GTGCCCGTGCGCA----GCGCGA--TGACTGGCTGAAGAAA--GAGATACAGCGCGTATA 52842 | || | |||| ||| || ||| || | |||| || |||||||| |||| Sbjct 11690 TTACCTGATCGCATTAAGCGGGACATGA--GGTT--AGAACTTGATATACAGCGGGTATG 11635 Query 52843 CGATGAAAATCACAAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGG 52902 | || ||| | || || |||| || ||||| ||||| |||||||| || ||||| Sbjct 11634 GAAAGACAATTTCCGCGTTTATGGTGCTCGCAAAGTATGGCGGCAGTTGTTGCGAGAAGG 11575 Query 52903 TATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGT 52962 ||| | || || | || || || | ||| | ||| | | ||| | ||||| Sbjct 11574 TATTGGTGTTGCTCGTTGTACGGTCGAACGGTTGATGAAGAAGCTTGGAATGCAAGGTGT 11515 Query 52963 TCTCCGGGGTAAAAAGGTCCGTACGACCAT--CAGCCGGAAAGCCGTTG-CCG--CAGGC 53017 || || || ||| || | || ||||| | | || || ||| ||| || Sbjct 11514 TCGACGCGGCAAAGAGTGTTGGACAACCATTTCGGACGATTTGC--TTGACCGGCCAACG 11457 Query 53018 GACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGGCTGATTTT 53077 ||| || ||||| || || || || || || | || |||||||||| ||| || Sbjct 11456 GACAAGGTTAACCGGCAATTTGTAGCTTCCCGGCCCAATCAATTGTGGGTGGCGGATATT 11397 Query 53078 ACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCC 53137 || | || || ||| ||||| || |||||||| || || | ||||| ||||| Sbjct 11396 ACCTTTGTGGCGACGTGGATTGGCTTTGTTTATGTGGCTTTTATTACCGATGTATTTGCA 11337 Query 53138 GGATACATTGTGGGGTGGCGGGTCTCATCGTCCATGGAGA-CGACATTCGTGCTGGATGC 53196 ||||||| || || ||| | ||| |||| ||| | || ||| | ||||||||||| Sbjct 11336 AGATACATCGTTGGCTGGAGAGTCAG-TCGTACATTGCGAACGAATCTGGTGCTGGATGC 11278 Query 53197 ACTGGAGCAGGCGTTATGGGCCCGTCG----ACCGTCCGGCACGGTCCATCACAGTGATA 53252 | |||| |||||| ||||||| || || |||| | || | | |||||||||||| Sbjct 11277 ATTGGAACAGGCGCTATGGGCACGGCGGGAAACCG-CAGGATTGATACATCACAGTGATC 11219 Query 53253 AAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTACTG- 53311 ||| |||||| ||||| | ||| || |||| || | || || | || || Sbjct 11218 GAGGCAGCCAGTATTTATCGATTCGCTATACGGAGCGCCTGATTGAGGC--TAATATTGA 11161 Query 53312 -GCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGG 53370 || || || |||| ||||| || |||||||| || |||| || | || || || Sbjct 11160 AGCTTCTGTTGGCAGTATCGGCGATTCTTATGACAATGCACTGGCCGAAACGATTAACGG 11101 Query 53371 TCTTTACAAAGCGGAGGTAAT 53391 | ||||| | ||||| || Sbjct 11100 ATTATACAAGACCGAGGTTAT 11080 >seq7071 Length=1310 Score = 127 bits (140), Expect = 8e-25 Identities = 696/1092 (64%), Gaps = 46/1092 (4%) Strand=Plus/Plus Query 52449 ATTGCCCCAAAGATTGGCTGTACGCCGGAGACTCTGCGTGTCTGGGTTCGCCAGCATGAG 52508 |||||||| ||||||||||| | || ||||| | | ||||||||||| ||| || Sbjct 217 ATTGCCCCCAAGATTGGCTGCATCCCAGAGACATTAAGGGTCTGGGTTCGGCAGGCGGAA 276 Query 52509 CGGGATACCGGGGGCGGTGATGGAGGGCTCACCACCGCTGAACGTCAGCGTCTGAAAGAG 52568 ||| | ||||| | || || | | |||| ||||||||| | || | |||||| Sbjct 277 AAGGACAGCGGGGCACGGGACGGTGCG---ACCAGCGCTGAACGCGATCGGATCAAAGAG 333 Query 52569 CTGGAGCGTGAAAATCGTGAACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCT 52628 ||||||| ||| ||| | || || | || || ||||| ||| |||| || ||| Sbjct 334 TTGGAGCGGGAAGTGCGTCAGCTCCGACAGGCGAATGAGATCCTGCGCAAGGCGTCGGCT 393 Query 52629 TATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAAAAAATGAT--GC--CACTGCTGGAT 52684 ||||||||| ||||||| ||||||||| | || ||||| || || || ||| Sbjct 394 TATTTTGCGCAGGCGGAACTCGACCGCCCGTTCAAGCCATGATCGGCTTCATTG-ACGAT 452 Query 52685 AAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCA 52744 | | ||||| || | ||||||| | | ||||| | |||| |||||||| ||| Sbjct 453 CATC-GCGTG-GC-TCATGGGGTCGAGTCTATCTGCAGAGTGCTGCCGATTGCCCCATCA 509 Query 52745 ACGTATTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAG 52804 || |||||| ||||| ||| ||||| || | ||| || |||| Sbjct 510 ACCTATTACGCCTGTCTCGCTGTGCGCGCCGATCCGTCCAAGGCCTCTGCACGCCAGCAG 569 Query 52805 CGCGATGACTGGCTGAAGA-AAGAGATACAGCGCGTATACGATGAAAATCACAAGGTATA 52863 | |||| | | | || | || ||| || | ||| | || |||| || Sbjct 570 AGGGATG-CGGTTTTGCGACCCAAAATCCAGAAGGTCTGGGATAACAACTGGGAGGTTTA 628 Query 52864 CGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATCAGAGTGGCCAGATGCAC 52923 |||||| || |||| |||||| ||| ||| || |||||| ||||| | ||||| Sbjct 629 CGGTGTCCGCAAAGCCTGGCGGCAGCTGTGCCGTGAAGGTGAAGCTGTGGCGCGCTGCAC 688 Query 52924 TGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCG 52983 ||||||||||||||| | ||||| || || || | || || ||||| || Sbjct 689 CGTGGCACGTCTCATGAAAGGCATGGGTCTGCGGGGAGTCGTTCGAGG---AAAGG-CCA 744 Query 52984 T----ACGACCATCAGCCGGAAAGCCGTTGC----CGCAGGCGACCGCGTAAACCGTCAG 53035 | || || ||| ||| | | | ||| | || |||| || |||||| || Sbjct 745 TGAAAACAACGATC-CCCGACACGTCAGTGCCATGCCCACGCGATAAGGTGAACCGTAAG 803 Query 53036 TTCGTGGCAGAACGACCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGG 53095 ||| ||| | || | ||||||||| || || || || ||| |||||| Sbjct 804 TTCCGAGCACCAGCGCCAAATATGCTGTGGGTAAGCGACTTCACCTATGTCTCAACATGG 863 Query 53096 CAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATTGTGGGGTGG 53155 ||||||||||| ||||| || ||| | || || || ||| |||||| || ||| Sbjct 864 CAGGGCTTCGTTTATGTCGCCTTCGTGATCGACACCTTCGCCAACCGCATTGTCGGATGG 923 Query 53156 CGGGTCTCATCGTCCATGGAGA-CGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATG 53214 || || ||| ||| |||| ||||| || |||||||| ||||| ||| | | Sbjct 924 AAGGCGTCGCGGTCTGCCAAGACCGAC-TTCGTCCTCGATGCACTTGAGCAAGCGCTTTA 982 Query 53215 GGCCCGTCGACCGTCC------GGCACG---GTCCATCACAGTGATAAAGGTTCTCAGTA 53265 ||||| || || || ||| | | |||||||| || || || || Sbjct 983 TGCCCGCCGTCCAACCTATCAAGGCGGGCTTATTCATCACAGCGACCGCGGCGGGCAATA 1042 Query 53266 TGTATCGCTGGCCTACACACAGCG---GCTTAAGGAAGCCGGATTACTGGCATCAACAGG 53322 || || | |||||| |||| | |||| || | || | || || Sbjct 1043 CGTGTCCATTCGCTACACCGAGCGATTGGCAAAGGCAGGCATCGAAC---CCTCCGTTGG 1099 Query 53323 AAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGC 53382 || |||||| | ||||||||||| |||| || | ||||| || || |||||| | Sbjct 1100 CAGCGTCGGCGACGCCTATGACAACGCCTTGGCTGAAACGATCAACGGCCTCTACAAAAC 1159 Query 53383 GGAGGTAATACACCG--TAAGAGCTGGAAAAACCGTGCA-GAAGTGGAACTGGCCACACT 53439 ||||| || | || || | | |||||| || | || || ||||||| || || Sbjct 1160 CGAGGTCATCCGGCGGCGTAGTTCATGGAAAACCATGGACGAGGTCGAACTGGAAACCCT 1219 Query 53440 CACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCACACTCCTCC 53499 || ||||| || |||| ||||| || || |||| ||| | || ||| || || Sbjct 1220 CAAATGGGTCGATTGGTTCAACAACCGCCGCCTGCTTGAACCTATCGGGAACATCCCACC 1279 Query 53500 GGCAGAAGCAGA 53511 ||| |||||||| Sbjct 1280 GGCTGAAGCAGA 1291 Score = 122 bits (134), Expect = 3e-23 Identities = 694/1093 (63%), Gaps = 48/1093 (4%) Strand=Plus/Plus Query 49609 ATTGCCCCAAAGATTGGCTGTACGCCGGAGACTCTGCGTGTCTGGGTTCGCCAGCATGAG 49668 |||||||| ||||||||||| | || ||||| | | ||||||||||| ||| || Sbjct 217 ATTGCCCCCAAGATTGGCTGCATCCCAGAGACATTAAGGGTCTGGGTTCGGCAGGCGGAA 276 Query 49669 CGGGATACCGGGGGCGGTGATGGTGGGCTCACCAGCGCTGAACGTCAGCGTCTGAAAGAG 49728 ||| | ||||| | || |||| | |||||||||||||| | || | |||||| Sbjct 277 AAGGACAGCGGGGCACGGGACGGTGCG---ACCAGCGCTGAACGCGATCGGATCAAAGAG 333 Query 49729 CTGGAACGTGAAAATCGTGAACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCT 49788 |||| || ||| ||| | || || | || || ||||| ||| |||| || ||| Sbjct 334 TTGGAGCGGGAAGTGCGTCAGCTCCGACAGGCGAATGAGATCCTGCGCAAGGCGTCGGCT 393 Query 49789 TATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAAAAAATGAT--GC--CACTGCTGGAT 49844 ||||||||| ||||||| ||||||||| | || ||||| || || || ||| Sbjct 394 TATTTTGCGCAGGCGGAACTCGACCGCCCGTTCAAGCCATGATCGGCTTCATTG-ACGAT 452 Query 49845 AAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGCGAACTGCATATTGCCCCGTCA 49904 | | ||||| || | ||||||| | | ||||| | |||| |||||||| ||| Sbjct 453 CATC-GCGTG-GC-TCATGGGGTCGAGTCTATCTGCAGAGTGCTGCCGATTGCCCCATCA 509 Query 49905 ACGTATTACCATTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAG 49964 || |||||| |||| ||| ||||| || | ||| || |||| Sbjct 510 ACCTATTACGCCTGTCTCGCTGTGCGCGCCGATCCGTCCAAGGCCTCTGCACGCCAGCAG 569 Query 49965 CACGATGACTGGCTGAAGA-AAGAGATACAGCGCGTATACGATGAAAATCACCAGGTATA 50023 |||| | | | || | || ||| || | ||| | || |||| || Sbjct 570 AGGGATG-CGGTTTTGCGACCCAAAATCCAGAAGGTCTGGGATAACAACTGGGAGGTTTA 628 Query 50024 CGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATCAGAGTGGCCAGATGCAC 50083 |||||| || |||| |||||| ||| ||| || |||||| ||||| | ||||| Sbjct 629 CGGTGTCCGCAAAGCCTGGCGGCAGCTGTGCCGTGAAGGTGAAGCTGTGGCGCGCTGCAC 688 Query 50084 TGTGGCACGTCTCATGGCAGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCG 50143 ||||||||||||||| || ||||| || || || | || || ||||| | Sbjct 689 CGTGGCACGTCTCATGAAAGGCATGGGTCTGCGGGGAGTCGTTCGAGG---AAAGGCCAT 745 Query 50144 CACTAC--CGTCAGCCGGAAAGCCGTTGC----CGCATGCGACCGCGTAAACCGTCAGTT 50197 | || || ||| | | | ||| | || |||| || |||||| |||| Sbjct 746 GAAAACAACGATCCCCGACACGTCAGTGCCATGCCCACGCGATAAGGTGAACCGTAAGTT 805 Query 50198 CGTGGCAGAACGTCCAGACCAGTTGTGGGTGGCTGATTTTACCTGGGTAAGCACATGGCA 50257 | ||| | ||| | | ||||||| || || |||| || |||||||| Sbjct 806 CCGAGCACCAGCGCCAAATATGCTGTGGGTAAGCGACTTCACCTATGTCTCAACATGGCA 865 Query 50258 GGGCTTCGTTTATGTGGCGTTCATCATTGATGTGTTCGCCGGATACATCGTGGGATGGCA 50317 ||||||||||||||| || ||| | || || |||||| ||| || |||||| | Sbjct 866 GGGCTTCGTTTATGTCGCCTTCGTGATCGACACCTTCGCCAACCGCATTGTCGGATGGAA 925 Query 50318 GGTCTC---ATCATCCATGGAAACAACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTG 50374 || || || ||| | | | || ||||| || |||||||| ||||| ||| | | Sbjct 926 GGCGTCGCGGTCTGCCAAG--ACCGAC-TTCGTCCTCGATGCACTTGAGCAAGCGCTTTA 982 Query 50375 GGCCCGTCGGCCGTC---------CGGCACAATCCATCACAGTGATAAAGGTTCTCAGTA 50425 ||||| || || | ||| || |||||||| || || || || Sbjct 983 TGCCCGCCGTCCAACCTATCAAGGCGGGCTTATTCATCACAGCGACCGCGGCGGGCAATA 1042 Query 50426 TGTATCGCTGGCCTACACGCAGCG---GCTTAAGGAAGCCGGATTACTGGCATCAACAGG 50482 || || | |||||| |||| | |||| || | || | || || Sbjct 1043 CGTGTCCATTCGCTACACCGAGCGATTGGCAAAGGCAGGCATCGAAC---CCTCCGTTGG 1099 Query 50483 GAGTACTGGCGACTCGTATGACAACGCGATGGCTGAGAGCATCAATGGTCTTTACAAAGC 50542 || |||||| | ||||||||||| ||||||| | ||||| || || |||||| | Sbjct 1100 CAGCGTCGGCGACGCCTATGACAACGCCTTGGCTGAAACGATCAACGGCCTCTACAAAAC 1159 Query 50543 GGAGGTAAT---ACACCGTAAGAGCTGGAAAAAC-CGGACAGAAGTGGAACTGGCCACAC 50598 ||||| || | |||| ||||||| | |||| || || ||||||| || | Sbjct 1160 CGAGGTCATCCGGCGGCGTAGTTCATGGAAAACCATGGAC-GAGGTCGAACTGGAAACCC 1218 Query 50599 TAACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATATTCCTC 50658 | | ||||| || |||| ||||| || || |||| ||| | || | || || | Sbjct 1219 TCAAATGGGTCGATTGGTTCAACAACCGCCGCCTGCTTGAACCTATCGGGAACATCCCAC 1278 Query 50659 CGGCAGAAGCAGA 50671 |||| |||||||| Sbjct 1279 CGGCTGAAGCAGA 1291 >seq5718 Length=3737 Score = 107 bits (118), Expect = 7e-19 Identities = 341/519 (66%), Gaps = 21/519 (4%) Strand=Plus/Plus Query 53009 GCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGAC-CAGCTGTGGGT 53067 |||||||| | || || ||||| || ||| ||| || || || || ||||| ||||| Sbjct 2790 GCCGCAGG--ATCGGGTCAACCGGCAATTCAAGGCGGATCGGCCAGAATCAGCTCTGGGT 2847 Query 53068 GGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGA 53127 | | |||||||| || || ||| ||| ||||| ||||||||||| ||| | ||||| Sbjct 2848 GTCGGATTTTACGTATGTGTCCACGTGGGCAGGCTTTGTCTATGTGGCCTTCGTGATTGA 2907 Query 53128 TGTGTTTGCCGGATACATTGTGGGGTGGCGGGTCTCATCGTCCATG-GAGACGACATTCG 53186 ||| |||||| | || || || ||||||||| || ||| || ||| || | Sbjct 2908 TGTCTTTGCCCGTCGGATCGTCGGTTGGCGGGTCAGCCGTTCGATGAGAACAGAC-TTTG 2966 Query 53187 TGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGA-CCGTCCGGCAC--------GG 53237 | || ||||| ||||| |||||| | | || |||| | ||| ||| || | Sbjct 2967 TTCTTGATGCGCTGGAACAGGCGCTCTATGCACGTCAACCCGAACGGGACAACAGCCTGA 3026 Query 53238 TCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGG 53297 | ||||| || || || ||||| || || | |||||| | ||||| | Sbjct 3027 TTCATCATTCGGACCGTGGGTCGCAGTACGTTTCTATTCGCTACACGGAACGGCTGGCAG 3086 Query 53298 AAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGG 53357 |||| || | | ||||| || || | ||||||| || || ||||| |||| | Sbjct 3087 AAGCTGGCATTGAGCCATCAGTTGGCAGCAAAGGCGACAGCTACGATAACGCACTGGCTG 3146 Query 53358 AGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAG----CTGGAAAAAC 53413 | | |||||| || | ||||| || || | || || || ||| || | || || Sbjct 3147 AAACCATCAACGGGTTGTACAAGGCCGAACTTATCCATCG-GCGAGGTCCCTAG-AAGAC 3204 Query 53414 CGTGCAG-AAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATT 53472 ||| || | ||||| | ||||| || ||||| ||||| |||| | | ||| | Sbjct 3205 CGTTGAGTCACTGGAAGTTGCCACCCTGGAATGGGTCACCTGGTTTAACTACCAGCGACT 3264 Query 53473 GCTGGAAAGGCTGGGCCACACTCCTCCGGCAGAAGCAGA 53511 |||||| | || |||| || || || |||||||| Sbjct 3265 TCTGGAACCCATTGGGCACATCCCACCTGCCGAAGCAGA 3303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185234521739744