Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq581 132 2e-26 seq367 123 1e-23 seq7071 114 5e-21 seq5718 109 2e-19 >seq581 Length=20508 Score = 132 bits (146), Expect = 2e-26 Identities = 687/1078 (64%), Gaps = 50/1078 (5%) Strand=Plus/Minus Query 56243 GCCCCGGTTTTCCTGGAGAGTGTTTTATCTGTGAACTCAGGCTGCCAGATCATCGTTTCC 56302 ||||||| |||| |||| ||||| | || | ||| || ||| ||| ||| | Sbjct 4403 GCCCCGGGATTCCCGGAGGCAGTTTTGTTTGAG---TCATGCGACCATATCGAGGTTCTC 4347 Query 56303 GATGGAAGCATAATAAGCTTTTTCTGCTTCTGCCGGAGGAGTATGGCCCAGCCTTCCCAG 56362 ||||| ||||| || ||| || || || || || | || || | ||| | Sbjct 4346 GATGGCTGCATAGTAGTTGGCTTCGGCCTCGGCGGGCGGGATGTGCCCGATGGGTCCGAA 4287 Query 56363 CAATCGTCGATTGTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCCACTTCTGCACG 56422 || || ||||||| ||||||| ||||| || || |||| |||||| | | | Sbjct 4286 CAGGCGGTGATTGTTGAACCAGTCTACCCAGCGCAGGGTCGCCATTTCCACCGCCGAAGC 4227 Query 56423 GTTTTTCCA---GCTCTTACGGTGTATTACCTCCGCTTTGTAAAGACCATTGATGCTCTC 56479 |||| ||| || || || || ||||| || ||||| || || ||||| |||| Sbjct 4226 GTTTGGCCATGAGCGCTGGCGCCAGATAACCTCGGCCTTGTAGAGGCCGTTGATCGTCTC 4167 Query 56480 AGCCATCGCGTTGTCATACGAGTCGCCTGTACTCCCTGTTGATGCCAGTAATCCGGCTTC 56539 |||| |||||||| || |||||| || || |||| || | ||| || Sbjct 4166 GGCCAAGGCGTTGTCGTAGCTGTCGCCGACGCTGCCGACCGATGGCACGAGGTTGGCCTC 4107 Query 56540 TTTTAGTCGCTCCGTATAGGCCAGTGACACATACTGAGAGCCTTTATCGCTGTGATGGAT 56599 || |||| || ||| || | || ||| ||| || |||||||| ||||| Sbjct 4106 GGCCAGGCGCTGGGTGTAGTTCATCGCCAGATATTGAACACCCCGGTCGCTGTGGTGGAT 4047 Query 56600 GGTGCCAGAC---------GGACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCAC 56650 |||| | || | ||||| | |||||||||||| ||||| ||||| Sbjct 4046 CAGGCCATCCTCGGCCCTGGGTCTGCGGGCATGGATCGCCTGCTCCAGGGCATCGAGCAC 3987 Query 56651 GAATGTCGTTTCCATAGACGATGAG---ACCCGCCACCCCACGATGTATCCGGCAAACAC 56707 ||| || || | | ||| | | ||| ||| |||||||| | ||||| | Sbjct 3986 GAAGCCCG---CCGTGGCCGAGGTGCTGACCTTCCAGCCCACGATCCGCCGAGCAAAGGC 3930 Query 56708 ATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGC 56767 ||| || | || || || |||||||| || ||| || ||||||||| || || | Sbjct 3929 ATCGATCACGAAGGCAACGTAGACGAACCCGGTCCAGGTATGGACGTAAGTGAAGTCGAC 3870 Query 56768 CACCCACAGCTGGTCAGGTCGTTCTG-CCACGAACTGACGGTTTACGCGGTCGCCTGCGG 56826 |||||||||| | || || ||| || ||||| ||||| || |||| |||| Sbjct 3869 CACCCACAGCGCATTGGGCCG-GCTGACCTTGAACTCGCGGTTCACCTTGTCG--AGCGG 3813 Query 56827 CAACG--GCTTTCCG---GCTGATGGTCGT-ACGGACCTTTTTACCCCGGAGAACACCGG 56880 ||| || ||| | ||||| || || || | ||| || |||||| |||| || | Sbjct 3812 GCACGGTGCCTTCGGATTACTGATCGTGGTCACCG-TCTTCTTGCCCCGGCGAACGCCCG 3754 Query 56881 CAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCC 56940 | || ||||| | ||| || ||| |||| || || || ||||| || | ||||| | Sbjct 3753 CGAGCCCCATGGCGCGCATCAGTCGTTCCACGGTGCACCTAGCCACTTTGGTCCCTTCGC 3694 Query 56941 GTAACAACTGACGCCAGACTTTACGCACACCGTACA-CCTGATGATTTTCATCGTATACG 56999 | || ||| ||||||| || || |||| || | | | | | ||| |||| ||| Sbjct 3693 GGCGCATCTGGTGCCAGACCTTGCGGGCACCATAGAGGCCAAAGCTGTTC-TCGTGGACG 3635 Query 57000 CGCTGTATC-TCTCTCTTCAGCCAGTCGTCGTGCTGCGCACGGGCACTGCGTTTATCCGG 57058 |||| ||| ||| ||| | | ||||||| || | |||||||| || | | || Sbjct 3634 CGCTTGATCGCCTCGCTT-ATCTCGTCGTCGCGCCGGGCACGGGCCGGACGCCTGCCGGG 3576 Query 57059 ATGATGTCGCTGTTGCTGACA--ATGGTAA---TACGTTGACGGGGCAATATGCAGTTCG 57113 | ||| || |||| || | | || | || ||||| | |||||| Sbjct 3575 A-----TCGGCAAGGCGGACAGCGTGTTCATGGTAGGAAGATGGGGCGACCGCCAGTTCA 3521 Query 57114 CTGCATACCGGTCCG--ACCCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTT 57171 | ||| | ||| || |||| || || || || | || | | | ||||| Sbjct 3520 CGGCAGATCGGCTCGATACCCAGTTCT--TCCCGGTGAGCGTCGATGAACGACATCACCA 3463 Query 57172 TTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATC 57231 ||| | | ||||||||| |||||||| ||||||||| || || |||| ||| ||||| || Sbjct 3462 TTTGCCGTGGCGGTCGAGCTCCGCCTGCGCAAAATATGCTGATGCCTTGCGCAGGATCTC 3403 Query 57232 GTTACTGCGGCGCAGTTCACGATTTTCACGTTCCAGCTCTTTCAGACGCTGACGTTCA 57289 ||| ||||| || || ||||| |||||| | || || || | ||||||| Sbjct 3402 GTTCGCCCGGCGAAGCTCCTTGACCTCACGCTCCAGCACCTTGAGCCGATCACGTTCA 3345 >seq367 Length=21361 Score = 123 bits (136), Expect = 1e-23 Identities = 688/1073 (64%), Gaps = 50/1073 (5%) Strand=Plus/Plus Query 56237 TGAACCGCCCCGGTTTTCCTGGAGAGTGTTTTATCTGTGAACTCAGGCTGC--CAGATCA 56294 |||| |||||||| ||| | ||||| ||||| ||| ||| ||| ||||| ||| | | Sbjct 10872 TGAATCGCCCCGGATTTTCCGGAGACTGTTTG-TCT-TGAG-TCAAGCTGCATCAGCTGA 10928 Query 56295 -TCGTTTCCGATGGAAGCATAATAAGCTTTTTCTGCTTCTGCCGGAGGAGTATGGCCCA- 56352 || || || | | |||||| || |||| ||||| ||| ||| ||| || | Sbjct 10929 CTCCCTTA--ATTGGCG-ATAATAGGCCATTTCAAATTCTGACGGCGGAATATTTCCGAT 10985 Query 56353 -GCCTTCCCAGCAATCGTCGATTGTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCC 56411 | || |||||| || ||| |||||| |||| || ||||| | || || | ||| Sbjct 10986 GGGCT--CCAGCAGTCTTCGGTTGTTAAACCAATCTACCCATTCCAAGGTCGCAAACTCC 11043 Query 56412 ACTTCTGCACGGTTTTTCCAGCTCTTACGGTGT---ATTACCTCCGCTTTGTAAAGACCA 56468 || || | || ||| || ||| || ||||| | ||||| | || Sbjct 11044 ACATCGTCGATATTGCGCCAAGGGCCGCGATGTCGAATAACCTCGGTCTTGTATAATCCG 11103 Query 56469 TTGATGCTCTCAGCCATCGCGTTGTCATACGAGTCGCCTGTACTCCCTGTTGATGC--CA 56526 || || | || |||| || |||||||| || ||||| |||| || || || || Sbjct 11104 TTAATCGTTTCGGCCAGTGCATTGTCATAAGAATCGCCGATACTGCCAACAGAAGCTTCA 11163 Query 56527 GTAATCCGGCTTCTTTTAGTCGCTCCGTATAGGCCAGTGACACATACTGAGAGCCTTTAT 56586 || | || || | || |||||||||||| | || | |||||| |||| || Sbjct 11164 ATATTA--GCCTCAATCAGGCGCTCCGTATAGCGAATCGATAAATACTGGCTGCCTCGAT 11221 Query 56587 CGCTGTGATGGATGGTGCCAGACGGA----CGACGGGCCCACAACGCCTGCTCCAGCGCA 56642 | |||||||| || || | ||| || || ||||| | |||||| |||| ||| Sbjct 11222 CACTGTGATGTATCAATCCTG-CGGTTTCCCGCCGTGCCCATAGCGCCTGTTCCAATGCA 11280 Query 56643 TCCAGCACGAATGTCGTT-TCCATAGACGATGAGACCCGCCACCCCACGATGTATCCGGC 56701 |||||||| | ||||| | || |||| ||| | ||| || |||||||||| || Sbjct 11281 TCCAGCACCAGATTCGTTCGCAATGTACGA-CTGACTCTCCAGCCAACGATGTATCTTGC 11339 Query 56702 AAACACATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAA 56761 ||| ||||| | ||||| |||||||| || ||||| ||| || || | |||| Sbjct 11340 AAATACATCGGTAATAAAAGCCACATAAACAAAGCCAATCCACGTCGCCACAAAGGTAAT 11399 Query 56762 ATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTACGCGGTCGCC 56821 ||| |||||||||| || | || || || || || || ||||| || ||| Sbjct 11400 ATCCGCCACCCACAATTGATTGGGCCGGGAAGCTACAAATTGCCGGTTAACCTTGTCCGT 11459 Query 56822 TG--CGG-CAACGGCTTTCCGGCTG--ATGGTCGTACGGACCTTTTTACCCCGGAGAACA 56876 || ||| ||| || || | | ||||| || | || ||| || || ||||| Sbjct 11460 TGGCCGGTCAA--GCAAATCGTCCGAAATGGTTGTCCAACACTCTTTGCCGCGTCGAACA 11517 Query 56877 CCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCT 56936 || | ||| | | ||| | ||| | || ||||| | || || | || ||| Sbjct 11518 CCTTGCATTCCAAGCTTCTTCATCAACCGTTCGACCGTACAACGAGCAACACCAATACCT 11577 Query 56937 TCCCGTAACAACTGACGCCAGACTTTACGCACACCGTACACCTGATGATTTTCATCGTAT 56996 || || |||||||| ||||| ||||| || |||| || || | ||| || | || Sbjct 11578 TCTCGCAACAACTGCCGCCATACTTTGCGAGCACCATAAACGCGGAAATTGTCTTTCCAT 11637 Query 56997 ACGCGCTGTATCTCTCTCTTCAGCCAGTCGTCGTGC----TGCGCACGGGCACTGCGTTT 57052 || |||||||| || | | || ||| || |||| | || | | || Sbjct 11638 ACCCGCTGTATATCAAGTTCTAACCTCATGTCCCGCTTAATGCGATCAGGTAAT-CG--- 11693 Query 57053 ATCCGGATGATG-TCG---CTGTTGCTGACAATGGTAATACGTTGACGGGGCAATATGCA 57108 |||||||| | ||| || ||| || | ||||| | |||||||||| || | Sbjct 11694 ATCCGGATCTCGCTCGCGTCTTTTG-TG---TTCATAATAACTCGACGGGGCAACCTGTA 11749 Query 57109 GTTCGCTGCATACCGGTCCGACCCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCATCA 57168 | || || || | ||||||| || | | | |||| | | | ||||| Sbjct 11750 TCTGTCTACAGACTGACTCGACCCCATATTCCGCTTTGTTTCTATCAACAAATAACATCA 11809 Query 57169 TTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGAT 57228 | |||| | ||||||||| |||||||| ||||||||||| || |||| || | || Sbjct 11810 TCATTTCGACCGGCGGTCGAGCTCCGCCTGGGCAAAATAAGCCGATGCCTTACGCAATAT 11869 Query 57229 ATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCAGCTCTTTCAGACGCT 57281 ||||| ||| | ||||||||| || ||||||| || || || |||| Sbjct 11870 CTCGTTGGCGCGCTTTAATTCACGATTCTCCCGTTCCAATTCCTTGAGTCGCT 11922 >seq7071 Length=1310 Score = 114 bits (126), Expect = 5e-21 Identities = 696/1095 (64%), Gaps = 52/1095 (5%) Strand=Plus/Minus Query 56325 TCTGCTTCTGCCGGAGGAGTATGGCCCAGCCTTCCCAGCAATCGTCGATTGTTATACCAG 56384 |||||||| ||||| || | | || | | | |||| || || ||||| |||| Sbjct 1291 TCTGCTTCAGCCGGTGGGATGTTCCCGATAGGTTCAAGCAGGCGGCGGTTGTTGAACCAA 1232 Query 56385 TCCACCCACGTTAGTGTGGCCAGTTCCACTTC-TGCACGGTTTTTCCAGCTCTTA--CGG 56441 || ||||| | || || ||||||| || || | || |||||| | | || || Sbjct 1231 TCGACCCATTTGAGGGTTTCCAGTTCGACCTCGTCCATGGTTTTCCATGAACTACGCCGC 1172 Query 56442 TGTATTACCTCCGCTTTGTAAAGACCATTGATGCTCTCAGCCATCGCGTTGTCATACGAG 56501 | || ||||| | |||||| || || ||||| | ||||||| ||||||||||| | | Sbjct 1171 CGGATGACCTCGGTTTTGTAGAGGCCGTTGATCGTTTCAGCCAAGGCGTTGTCATAGGCG 1112 Query 56502 TCGCCTGTACTCCCTGTTGATGCCAGTAATCCGGCTTCTTTTAGTCGCTCCGTATAGGCC 56561 ||||| || || || | | || || | | | |||||| || ||| Sbjct 1111 TCGCCGACGCTGCCAACGGAGGGTTCGATGCCTGCCTTTGCCAATCGCTCGGTGTAGCGA 1052 Query 56562 AGTGACACATACTGAGAGCCTTTATCGCTGTGATGGATGGTGCCAGAC----------GG 56611 | ||||| || || ||| ||||||||||| || ||| | | || Sbjct 1051 ATGGACACGTATTGCCCGCCGCGGTCGCTGTGATGAATAA-GCCCGCCTTGATAGGTTGG 993 Query 56612 ACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTT-TCCATAGACG 56670 ||| ||||| | | ||| ||||| || ||||| || ||||| |||| | | |||| Sbjct 992 ACGGCGGGCATAAAGCGCTTGCTCAAGTGCATCGAGGACGAA-GTCGGTCTTGGCAGACC 934 Query 56671 ATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGA 56730 || || ||| || || ||| ||| || || || | || || ||||| | Sbjct 933 GCGACGCCTTCCATCCGACAATGCGGTTGGCGAAGGTGTCGATCACGAAGGCGACATAAA 874 Query 56731 CGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTT 56790 |||||||||||||||| ||| || || || || ||||||||| | || | Sbjct 873 CGAAGCCCTGCCATGTTGAGACATAGGTGAAGTCGCTTACCCACAGCATATTTGGCGCTG 814 Query 56791 CTGCCACGAACTGACGGTTTACGCGGTCGCCTGCG----GCAACGGCTTTCCGGCTGATG 56846 ||| ||||| |||||| || |||| || | ||| | | | ||| ||| Sbjct 813 GTGCTCGGAACTTACGGTTCACCTTATCGCGTGGGCATGGCACTGACGTGTCGGG-GATC 755 Query 56847 GTCGT----ACGGACCTTTTTACCCCGGAGAACACCGGCAAGTCCCATAACCGCCATGAG 56902 || || | || ||||| || || | || || || ||||| | |||||| Sbjct 754 GTTGTTTTCATGG-CCTTT---CCTCGAACGACTCCCCGCAGACCCATGCCTTTCATGAG 699 Query 56903 ACGTGCCACTGTACATCTGGCCACCCTGATTC--CTTCCCGTAACAACTGACGCCAGACT 56960 ||||||||| || || | ||||| | ||| |||| || ||| ||| |||||| || Sbjct 698 ACGTGCCACGGTGCAGCGCGCCACA--GCTTCACCTTCACGGCACAGCTGCCGCCAGGCT 641 Query 56961 TTACGCACACCGTACACCTGATGATTTTCATCGTATACGCGCTGTATCTC---TCTCTTC 57017 || || |||||||| |||| || | ||| | || ||| || | || | Sbjct 640 TTGCGGACACCGTAAACCTCCCAGTTGTTATCCCAGACCTTCTGGATTTTGGGTCGCAAA 581 Query 57018 AGC-CAGTCGTCGTGCTGCGCACGGGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTG 57076 | | || | || ||||| || ||| | || ||||| ||| | Sbjct 580 ACCGCATCCCTC-TGCTGG---CGTGCAGAGGCCTTGGACGGATCGGCGCGCACAGCGAG 525 Query 57077 ACAATGGTAATACGTTGACGGGGCAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTA 57136 ||| |||||| ||||| |||||||| |||| | ||||| | | ||||||| | Sbjct 524 ACAGGCGTAATAGGTTGATGGGGCAATCGGCAGCACTCTGCAGATAGACTCGACCCCATG 465 Query 57137 CTGCTCACGCAGCTTATCCAGCAGTG--GC--ATCATTTTTTCCAGAGGCGGTCGAACTC 57192 || ||||| | | ||| || || || ||||| || | ||||||||| || Sbjct 464 A-GC-CACGC-GATGATCGT-CAATGAAGCCGATCATGGCTTGAACGGGCGGTCGAGTTC 409 Query 57193 CGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGTTACTGCGGCGCAGTTCACG 57252 ||||| |||||||||||| || |||| ||| ||||| || || | || || | ||| Sbjct 408 CGCCTGCGCAAAATAAGCCGACGCCTTGCGCAGGATCTCATTCGCCTGTCGGAGCTGACG 349 Query 57253 ATTTTCACGTTCCAGCTCTTTCAGACGCTGACGTTCAGCGCTGGTGAGCCCACCATCACC 57312 ||| || |||| |||||| | || | |||||||||||||| | |||| || | Sbjct 348 CACTTCCCGCTCCAACTCTTTGATCCGATCGCGTTCAGCGCTGGT---CGCACCGTCCCG 292 Query 57313 GCCCCCGGTATCCCGCTCATGCTGGCGAACCCAGACACGCAGAGTCTCCGGCGTACAGCC 57372 ||||| | ||| || ||| ||||||||||| | | ||||| || | ||||| Sbjct 291 TGCCCCGCTGTCCTTTTCCGCCTGCCGAACCCAGACCCTTAATGTCTCTGGGATGCAGCC 232 Query 57373 AATCTTTGGGGCAAT 57387 |||||| |||||||| Sbjct 231 AATCTTGGGGGCAAT 217 >seq5718 Length=3737 Score = 109 bits (120), Expect = 2e-19 Identities = 260/388 (67%), Gaps = 14/388 (4%) Strand=Plus/Minus Query 56451 TCCGCTTTGTAAAGACCATTGATGCTCTCAGCCATCGCGTTGTCATACGAGTCGCCTGTA 56510 || || ||||| | || |||||| | ||||||| ||||| || || ||||||| | Sbjct 3174 TCGGCCTTGTACAACCCGTTGATGGTTTCAGCCAGTGCGTTATCGTAGCTGTCGCCTTTG 3115 Query 56511 CTCCCTGTTGATGCCAGTAATCCGGCTTCTTTTAGTCGCTCCGTATAGGCCAGTGACACA 56570 || || ||||| | | || |||||| || || ||||| ||| | || || Sbjct 3114 CTGCCAACTGATGGCTCAATGCCAGCTTCTGCCAGCCGTTCCGTGTAGCGAATAGAAACG 3055 Query 56571 TACTGAGAGCCTTTATCGCTGTGATGGATG--------GTGCCAGACGGAC-GACGGGCC 56621 ||||| || || || ||||| || || || ||| |||| || Sbjct 3054 TACTGCGACCCACGGTCCGAATGATGAATCAGGCTGTTGTCCCGTTCGGGTTGACGTGCA 2995 Query 56622 CACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTC-CATAGACGATGAGACCCG 56680 | | |||||| ||||||||||| || || || ||| ||| ||| || |||||| Sbjct 2994 TAGAGCGCCTGTTCCAGCGCATCAAGAACAAA-GTCTGTTCTCATCGAACGGCTGACCCG 2936 Query 56681 CCACCCCACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAGACGAAGCCCTG 56740 ||| || ||||| | |||||| |||||||| | || ||||||||||| ||||| Sbjct 2935 CCAACCGACGATCCGACGGGCAAAGACATCAATCACGAAGGCCACATAGACAAAGCCTGC 2876 Query 56741 CCATGTGCTGACGTAAGTAAAATCAGCCACCCACAGCTG-GTCAGGTCGTTCTGCCACGA 56799 ||| ||| || || |||||||| | |||||| ||||| || || || || ||| || Sbjct 2875 CCACGTGGACACATACGTAAAATCCGACACCCAGAGCTGATTCTGGCCGATCCGCCTTGA 2816 Query 56800 ACTGACGGTTTACGCGGTCGCCTGCGGC 56827 | || ||||| || || | |||||||| Sbjct 2815 ATTGCCGGTTGACCCGAT--CCTGCGGC 2790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200512315898532