Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq4979 86.0 3e-12 >seq4979 Length=1283317 Score = 86.0 bits (94), Expect = 3e-12 Identities = 217/328 (66%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 10140 ATGGCAAGCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTCCGT 10199 |||||| ||| || || | |||| | ||||| || | || ||||| |||||| | Sbjct 318237 ATGGCATCCGTTAATAAAGCAATTATCGTTGGCAATCTGGGCAAGGATCCGGAAGTCAGA 318296 Query 10200 TACCTGCCGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAG 10259 || | | || ||||| ||| || ||||| | | ||||| | ||| | ||| Sbjct 318297 TATACGGCCAGTGGCGAGGCGATTTGCAACATTACTGTGGCGACCAGCGAAAACTGGAAG 318356 Query 10260 GACAAGGCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGT 10319 |||||| ||| ||| || | || || ||| || ||||| ||| | || || ||||| Sbjct 318357 GACAAGACGACCGGAGAGAAGAAAGAACAGACCGAGTGGCATCGCATTTCTTTTTTCGGA 318416 Query 10320 CGGCTGGCTGAGATCGTCGACGAGCACCTGCGCAAGGG--CGCATCTGTCTACATCGAGG 10377 ||||||||| | | | | || | || ||||| |||| | ||| |||||| Sbjct 318417 AAGCTGGCTGAAGTTGCAGGCCAGTATCTTAAAAAGGGATCGCAGAT--CTATGTCGAGG 318474 Query 10378 GGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGAGA 10437 | | ||| || ||||||||| || | |||||||| |||||||||||||||| Sbjct 318475 GCAGTATCCGTACCCGGAAGTGGACCGACAAGGAAGGCCAGGAGCGTTACACGACCGAGA 318534 Query 10438 TCGTCGCTGACCGCATGCAGATGCTCGG 10465 | || ||| ||| | |||||||| Sbjct 318535 TTCGCGGCGACGAGATGAAAATGCTCGG 318562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204275101471428