Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1224 100 2e-16 >seq1224 Length=1352561 Score = 100 bits (110), Expect = 2e-16 Identities = 160/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 25488 TCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAG 25547 || ||||| || | || || | |||||| ||||| ||| ||||||| || ||||| || Sbjct 1087475 TCGAGCCCAGTGATGTGTGCAAGCATGTATGTGAGCAGAGAGTAGCTAGCAATGTTGAAC 1087534 Query 25548 GGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT--CTTCG 25605 || ||||||| |||||||| | || | |||||| | |||||||||||| | | || Sbjct 1087535 GGCACCCCGAGGCCCATGTCTGCT-GAACGCTGGTACATCTGACACGAGAGATAGCGGCG 1087593 Query 25606 -TCGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTC 25664 ||| |||||| ||||| || || ||| || || ||||| || |||| ||| Sbjct 1087594 CTCGGCCACGTAGAACTGCACCAGACAGTGGCAGGGGGGCAGAGCCATGGCCCCCAGGTC 1087653 Query 25665 TTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTG 25710 || ||||| || | || |||||||| | ||| ||||| ||| Sbjct 1087654 AGCGGGATTCCAAGCACTCATGATGATGCGTCGGTCATCTGGATTG 1087699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340100141921628